Pairwise Alignments

Query, 460 a.a., predicted diguanylate cyclase (RefSeq) from Escherichia coli BW25113

Subject, 351 a.a., GGDEF domain membrane protein from Marinobacter adhaerens HP15

 Score =  114 bits (285), Expect = 5e-30
 Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 2/178 (1%)

Query: 277 SQIITLLRELFEEVSRHEVGMDVLTKLLNRRFLPTIFKREIAHANRTGTPLSVLIIDVDK 336
           S I  + RE  E         D LT L NR  L  +F++E   + R GTPLSVL++D+D 
Sbjct: 163 SHIYEITREQSESRLLKMAQTDALTGLANRARLSDVFEQERKRSLRNGTPLSVLVLDLDH 222

Query: 337 FKEINDTWGHNTGDEILRKVSQAFYDNVRSSDYVFRYGGDEFIIVLTEASENETLRTAER 396
           FK++ND  GH  GD  LR V+     ++R++D   R GG+EF I+LT  + ++  R A++
Sbjct: 223 FKQVNDQHGHEAGDLALRHVASTLRASLRATDLATRLGGEEFAILLTNTTADQAHRVADK 282

Query: 397 IRSRVEKTKLKAANGEDIALSLSIGAAMFN-GHPDYERLIQIADEALYIAKRRGRNRV 453
           IR  +E   +   + + I L++S G A F     D   LI  AD+ LY AK  GRNR+
Sbjct: 283 IRGAIESHPVPYQD-QSIGLTISGGIAQFGPDGGDLRSLIGRADQYLYHAKDSGRNRI 339