Pairwise Alignments

Query, 308 a.a., D-ala-D-ala transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 336 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  252 bits (643), Expect = 1e-71
 Identities = 133/318 (41%), Positives = 199/318 (62%), Gaps = 18/318 (5%)

Query: 5   LLTLRD--VHINFPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQLL 62
           LL ++D  VH N   +  W       + A++G+++++  GETLG+VGESGCGKST A+ +
Sbjct: 14  LLDVKDLKVHFNITPKSAWPWTKPVTLKAVDGVNVRLYEGETLGVVGESGCGKSTFARAI 73

Query: 63  MGMLQPSHGQYI-------------RSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLW- 108
           +G++Q +HG+ +             R  +++ +QM+FQDPL+SLNPR+ V  II EPL  
Sbjct: 74  IGLVQATHGEVVWLGQDLTRMQEVKRRATRKQIQMIFQDPLASLNPRMTVGDIIAEPLQT 133

Query: 109 IAKRSSEQQRRALAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDE 168
                S+Q+ +   +E+  +VG+ P  ++R PH FSGGQ QRI IARAL  +P +I+ DE
Sbjct: 134 FYPELSKQEVKDRVKEMMAKVGLLPNVINRYPHEFSGGQCQRIGIARALILKPKMIICDE 193

Query: 169 PTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQ 228
           P SALD+S+QAQ++NLL  LQ+  GL+ V I+H++SV++H+SDRV VMYLG  VELG ++
Sbjct: 194 PVSALDVSIQAQVVNLLKELQKELGLSLVFIAHDLSVVKHISDRVLVMYLGNAVELGVSK 253

Query: 229 QVLTAPAHPYTRLLLDSLPAIDKPLEEEWALR--KTDLPGNRTLPQGCFFYERCPLATHG 286
           ++   P HPYT+ L+ ++P  D  +E    ++  + DLP     P GC F  RCP AT  
Sbjct: 254 ELFANPKHPYTKALMSAVPIPDPNIERNKTIQMLEGDLPSPMNPPSGCVFRTRCPQATAE 313

Query: 287 CEVRQSLAIREDGRELRC 304
           C   + +    D   + C
Sbjct: 314 CAKTKPVIKGSDIHSVSC 331