Pairwise Alignments

Query, 308 a.a., D-ala-D-ala transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 344 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  251 bits (640), Expect = 2e-71
 Identities = 133/292 (45%), Positives = 183/292 (62%), Gaps = 13/292 (4%)

Query: 29  VHAINGIDLQIRRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSG----------- 77
           VHA+  +  ++  G TL +VGESGCGKSTLA+ +  + +PS G    +G           
Sbjct: 44  VHALTDVSFRLAPGRTLAVVGESGCGKSTLARQVTLIEEPSEGTLRINGKAVAFADEAAV 103

Query: 78  --SQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRALAEELAVQVGIRPEY 135
             ++R +Q+VFQDP  SLNPR  V  I+ EPL I       +RR    E+  +VG+RPE+
Sbjct: 104 KDARRSVQIVFQDPYGSLNPRWKVRTILDEPLAINTTLGAAERREKVAEMMARVGLRPEF 163

Query: 136 LDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQILNLLVTLQENHGLT 195
             R PH FSGGQRQRIAIARAL   P V+V DEP SALD+SVQAQ+LNLL+ LQ++ G+ 
Sbjct: 164 ATRYPHMFSGGQRQRIAIARALMLNPRVVVADEPVSALDVSVQAQVLNLLMDLQQDFGVA 223

Query: 196 YVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEE 255
           ++ ISH++SV+RH+S+ + VMYLG++VE+G  + +  APAHPYT+ L+ + P +D     
Sbjct: 224 FLFISHDLSVVRHISNDLMVMYLGRVVEMGPKEAIFGAPAHPYTQALMAATPKLDPGARR 283

Query: 256 EWALRKTDLPGNRTLPQGCFFYERCPLATHGCEVRQSLAIREDGRELRCWRA 307
                K +LP   + P GC F+ RCPLA   C+ +        GRE+ C RA
Sbjct: 284 SREPLKGELPSPLSPPPGCTFHTRCPLAVAMCKQQIPTLRPVGGREVACHRA 335