Pairwise Alignments

Query, 308 a.a., D-ala-D-ala transporter subunit (NCBI) from Escherichia coli BW25113

Subject, 326 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  250 bits (639), Expect = 3e-71
 Identities = 139/310 (44%), Positives = 190/310 (61%), Gaps = 16/310 (5%)

Query: 15  FPARKNWLGKTTEHVHAINGIDLQIRRGETLGIVGESGCGKSTLAQLLMGMLQPSHGQYI 74
           +  R++ L + +  V A++ +   +  GETLG+VGESGCGKSTL + L+ +   S G   
Sbjct: 17  YQTRRSPLRRPSPPVVAVDQVTFDVWPGETLGLVGESGCGKSTLGRCLLRLTDISAGTLE 76

Query: 75  RSG-------------SQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRAL 121
             G             ++R MQMVFQDP +SLNPR  V  ++ EPL + K  +E+Q    
Sbjct: 77  FEGRDITKASLHALRPTRRRMQMVFQDPYASLNPRRRVGDLLAEPLRVHKLGTERQIADR 136

Query: 122 AEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQI 181
             EL  QV +RP++  R PH FSGGQRQRI IARAL+ +P +IV DEP SALD+SVQAQ+
Sbjct: 137 VAELLTQVDLRPDHAQRYPHEFSGGQRQRIGIARALALEPRLIVADEPVSALDVSVQAQV 196

Query: 182 LNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTRL 241
           +NL+  L+E  GLTYV I+H++SV+RH+S RVAVMYLG IVE+G    +  +P HPYT+ 
Sbjct: 197 INLMTDLRERLGLTYVFIAHDLSVVRHISSRVAVMYLGAIVEIGATDDIFGSPHHPYTQA 256

Query: 242 LLDSLPAI--DKPLEEEWALRKTDLPGNRTLPQGCFFYERCPLATHGCE-VRQSLAIRED 298
           LL ++P    D+    +  L + ++P     P GC F+ RCP A   C  V   LA  E 
Sbjct: 257 LLSAVPVTDPDRSKRRQRILLEGEIPNPSHRPSGCRFHSRCPYADDQCRAVSPPLAAAER 316

Query: 299 GRELRCWRAL 308
           GR + C + L
Sbjct: 317 GRLVACHKPL 326