Pairwise Alignments

Query, 1300 a.a., ATP-dependent helicase (RefSeq) from Escherichia coli BW25113

Subject, 1289 a.a., ATP-dependent helicase HrpA (RefSeq) from Shewanella amazonensis SB2B

 Score = 1520 bits (3935), Expect = 0.0
 Identities = 767/1275 (60%), Positives = 977/1275 (76%), Gaps = 5/1275 (0%)

Query: 23   DRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQK 82
            D  R  R L  ++++ +  A+ A F+ +A+  + A  KV  R +ARP I YPDNLPVSQK
Sbjct: 20   DVARIRRELRDIERLGDETAKAAAFERLAERAEAAKAKVDARLSARPRIHYPDNLPVSQK 79

Query: 83   KQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRI 142
            + DI EAI  HQVVIVAGETGSGKTTQLPKIC+ELGRG +GLIGHTQPRRLAAR+VA R+
Sbjct: 80   RDDIAEAIAKHQVVIVAGETGSGKTTQLPKICLELGRGSRGLIGHTQPRRLAARSVATRV 139

Query: 143  AEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHER 202
            A+EL++  G  +G+KVRF+D +++N+ +KLMTDGILLAE+  D+ L QYDT+IIDEAHER
Sbjct: 140  ADELQSPLGEAVGFKVRFADAINENSYIKLMTDGILLAELSSDKYLNQYDTLIIDEAHER 199

Query: 203  SLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYRP 262
            SLNIDF+LGYLK+LLPRRPDLK+IITSATID +RFS HF+ AP+IEVSGRTYPVE RYRP
Sbjct: 200  SLNIDFILGYLKQLLPRRPDLKVIITSATIDVDRFSTHFDKAPVIEVSGRTYPVETRYRP 259

Query: 263  IVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHTEILP 322
            +V++ D+ + D +  IF+AVDEL  E  GDILIFM+GEREIRDTA+ L++   R TE+LP
Sbjct: 260  LVKD-DEPDLDLMDGIFEAVDELMAEGPGDILIFMNGEREIRDTAEQLSRRQYRDTEVLP 318

Query: 323  LYARLSNSEQNRVFQSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQR 382
            LYARLS  EQ++VF+SH+GRRIVLATNVAETSLTVPGI+YVIDPGTARISRYSYRTKVQR
Sbjct: 319  LYARLSYGEQSKVFKSHTGRRIVLATNVAETSLTVPGIRYVIDPGTARISRYSYRTKVQR 378

Query: 383  LPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTA 442
            LPIEPISQASANQR+GRCGRV  GICIRLY E DFLSRPEFTDPEILRTNLASVILQM A
Sbjct: 379  LPIEPISQASANQRQGRCGRVGPGICIRLYEETDFLSRPEFTDPEILRTNLASVILQMLA 438

Query: 443  LGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRL 502
            +GLGDI  FPF++ PD+R+I+DG  LLEEL AI   +     ++TPLGR+L+ +P+DPRL
Sbjct: 439  IGLGDIKGFPFIQPPDERHIKDGFLLLEELQAIKLKKGLP--QMTPLGRKLAHVPLDPRL 496

Query: 503  ARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLW 562
            ARMV+EA   G + EA+++TSALSIQDPRERP++K+QA+DE H RF DK+SDF++ +NLW
Sbjct: 497  ARMVIEAADRGALHEALVVTSALSIQDPRERPLEKKQAADEAHSRFADKDSDFVSLLNLW 556

Query: 563  NYLGEQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREI 622
            NY+ EQQKALS++ FR+LC+ +YL YLRVREWQD+YTQ+RQ V EL + +NS PA+Y  +
Sbjct: 557  NYIKEQQKALSASQFRKLCKQEYLAYLRVREWQDLYTQVRQSVHELKLKLNSVPADYDSL 616

Query: 623  HIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR 682
            H ALL+GLLSH+G KD +  EY GARN RF +FPGS L KK PKW++ AEL ETSRL+ R
Sbjct: 617  HRALLSGLLSHVGFKD-NNNEYLGARNRRFYVFPGSPLAKKGPKWIVAAELTETSRLFAR 675

Query: 683  IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDP 742
              A+I+PEW+E +A HLIK+ ++EP +E  QGAV+A E   +YGL +V  RKV Y  I+ 
Sbjct: 676  GCAKIEPEWLEELAAHLIKKQHNEPQFEANQGAVVAFENQVLYGLTVVNRRKVQYGPINA 735

Query: 743  ALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQR 802
               RE+FIR AL EG  +TR AFF  N KL  EVE LEHKSRRRDILVD++ LF+FY++R
Sbjct: 736  IEAREIFIRSALAEGQLKTREAFFLHNQKLLEEVESLEHKSRRRDILVDEQVLFDFYNER 795

Query: 803  ISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLS 862
            +   + +A    SWWK+  R+ P+LLNF + ML       ISKLD+P+ WHQGNL   LS
Sbjct: 796  LPEGIYNAPKLFSWWKEARRKQPELLNFNEDMLYARQTGHISKLDFPDVWHQGNLSFALS 855

Query: 863  YQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPVRRNFVPAP 922
            Y FEPGA+ DGV+VHIP+ LLNQVE+SGF++ +PGLR E  IALIKSLPK +RRNFVPAP
Sbjct: 856  YHFEPGAEDDGVSVHIPVALLNQVEDSGFDFLVPGLREEKCIALIKSLPKSLRRNFVPAP 915

Query: 923  NYAEAFLGRVKPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDKNKK 982
            +YA A + +   L+LPLL+SL ++L RMTG  V  ED+   ++P HL + F++ DD  K 
Sbjct: 916  DYARAAV-QAMSLDLPLLESLSKQLLRMTGTRVSGEDFVLTELPKHLLMHFKIEDDHGKL 974

Query: 983  LKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWP 1042
            + EGR L  LK +L+G V + +  VA  GIEQ+GL  WS   LP  +++K+GNY+VKA+P
Sbjct: 975  VGEGRDLDALKASLQGVVAKAIRQVAKSGIEQAGLTEWSIDDLPAQFQRKKGNYEVKAFP 1034

Query: 1043 ALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPY 1102
            ALVDE++SVA+KLFD+  + ++A   G+RRLLL+NIPSP+K+L + LPNKAKL +YFNP+
Sbjct: 1035 ALVDEKESVAVKLFDDEHQAQKAHAQGVRRLLLINIPSPVKHLQQALPNKAKLAMYFNPF 1094

Query: 1103 GKVLELIDDCISCGVDKLIDANGGPVWTEEGFAALHEKVRAELNDTVVDIAKQVEQILTA 1162
            G+V  LI+D I   V +++D     V T+ GF    + VRA+LN     I+ +VEQILT 
Sbjct: 1095 GQVQLLIEDIIDAAVAQILDEQRLEVRTKAGFDVARDAVRADLNSVAEQISLKVEQILTL 1154

Query: 1163 VFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKRLEK 1222
               I KRLKG++ + +A  +SDI+ Q+  LVY+GFV   G  RL D +R+L+AIE RLEK
Sbjct: 1155 HNQIKKRLKGKISLDIAFAMSDIQTQLDRLVYKGFVADCGHARLSDIIRFLKAIEHRLEK 1214

Query: 1223 LAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGT 1282
            L VDP RD+ Q+L +  V+QA +  + K+P ++   E + E RW+IEELRVS FAQ LGT
Sbjct: 1215 LPVDPVRDKLQLLSIHKVEQALEAQLAKVPKSQPVPEHLLEARWLIEELRVSLFAQVLGT 1274

Query: 1283 PYPISDKRILQAMEQ 1297
              PIS+KR+L  ++Q
Sbjct: 1275 SVPISEKRVLLHIQQ 1289