Pairwise Alignments

Query, 299 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

Subject, 310 a.a., transcriptional regulator from Herbaspirillum seropedicae SmR1

 Score =  237 bits (604), Expect = 3e-67
 Identities = 122/294 (41%), Positives = 184/294 (62%), Gaps = 1/294 (0%)

Query: 1   MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEERLGLRLLTRTTRSVVP 60
           M+  E  +L AFV V E +SF RAA  L ++ SALSQ +R++E+R+G RLL RTTRSV P
Sbjct: 1   MRGSEFNELKAFVAVVERQSFVRAAEHLGLSPSALSQTIRQLEDRIGARLLNRTTRSVAP 60

Query: 61  TEAGEHLLSVLGPMLHDIDSAMASLSDLQNRPSGTIRITTVEHAAKTILLPAMRTFLKSH 120
           +  GE L   + P+  ++ +A+A  S+   + SG +RI T+  AA+TI+ P +  F ++H
Sbjct: 61  SANGELLYRRVAPLFREMAAAVAQASEATGQMSGRLRINTLGIAARTIIAPRLARFHQAH 120

Query: 121 PEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRIGPDIPMAIVGSPDYFSRRSV 180
           P++ + + +D  LTD+V+ RFDAG+R+G  ++KDM+AIR+ PD+ M  V SPDY +RR V
Sbjct: 121 PDVVLDIVVDDTLTDIVAGRFDAGIRVGNRVEKDMVAIRLTPDLNMVAVASPDYLARRGV 180

Query: 181 PTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVRMEGQLLLNTIDLIIDAAIDGHG 240
           P S   L DH  IN  L   G   RW   + G+++ V ++G ++ N  D+ I AA+ G G
Sbjct: 181 PRSPKDLHDHTCINWRLQMDGRHYRWEFKKRGQQLEVAVDGPIITNHADIGIAAALGGLG 240

Query: 241 LAY-LPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYYPHRRHAGSAFSLFIDRL 293
           +AY    D V   + + +L++VL  ++   PG  LYYP+R+H  +    FID L
Sbjct: 241 IAYHFERDGVSELLSQGRLVQVLADWSISRPGLFLYYPNRQHRPALLGAFIDCL 294