Pairwise Alignments

Query, 280 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 280 a.a., sugar ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  171 bits (433), Expect = 2e-47
 Identities = 95/278 (34%), Positives = 164/278 (58%), Gaps = 6/278 (2%)

Query: 5   KRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFN 64
           K+ L R+GF+C + + L+  +FPF+  ++TS K +     +   +    ++  +Y  + +
Sbjct: 7   KKALLRLGFWCLIGILLLYAVFPFYYAIVTSLKPSSALFEVSYWIDSPDFS--NYAAVLH 64

Query: 65  PMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGIL 124
                F+    NSLVV++    +A+FL +  AYAL R++F+GR T+      V MF  + 
Sbjct: 65  QS--SFLRAIGNSLVVALCVVTLALFLSLTAAYALGRVKFRGRGTVLMMVLGVSMFPQVA 122

Query: 125 LVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRL 184
           ++  LF++I ALG+Y+T  ALI++    TLP  V++L ++   +P E+EEAA+MDG +  
Sbjct: 123 VLSGLFEVIRALGLYNTSWALILSYTIFTLPFTVWVLTTFMGQLPHELEEAAIMDGASPW 182

Query: 185 QIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALF--STPDY 242
             + R+ +PL    L++  +  F+ AWN++LFA  F  + +  T+PV +  +   S  + 
Sbjct: 183 VTLTRVLLPLLWPALVTTGLLAFIAAWNEFLFALTFTLTDTQRTVPVAIALISGGSPHEL 242

Query: 243 IWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG 280
            WG +MAAS++  +P+VI+  + +R I SGLTAG +KG
Sbjct: 243 PWGLLMAASVLVTVPLVILVLIFQRRIVSGLTAGALKG 280