Pairwise Alignments

Query, 280 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 274 a.a., carbohydrate ABC transporter permease from Rhodanobacter denitrificans MT42

 Score =  138 bits (347), Expect = 2e-37
 Identities = 78/259 (30%), Positives = 138/259 (53%), Gaps = 4/259 (1%)

Query: 22  IITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSLVVS 81
           ++ LFP   ML  SF    EA +L P LLP   TL +Y ++F  +      Y  NS++V+
Sbjct: 20  VVALFPLLWMLSVSFMAPGEASALPPPLLPAHATLGNYRELF--VRAGMGRYLLNSVLVA 77

Query: 82  VVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDT 141
              + +++   ++  YA ++LRF GR  +  +     +    + ++PLF ++  +G+ ++
Sbjct: 78  GAVTALSLVFNLMAGYAFAKLRFAGRERLFRALLGALVIPAQVAMLPLFLLLKYMGLVNS 137

Query: 142 EMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLIS 201
              ++   +       +F+++ Y   IPDE+ EAA +DG     I  RI +PL    +++
Sbjct: 138 YAGVVAPALASVF--GIFLVRQYARGIPDELLEAARIDGAGEWHIFTRIVLPLLKPIIVT 195

Query: 202 VFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIM 261
           + ++ F+ AWND+++  I L+   ++TLP+GL +L          MMA S+VT LPV+ +
Sbjct: 196 LAIFTFLAAWNDFMWPLIALTGQEHYTLPIGLASLAREHAQDSELMMAGSVVTVLPVLAL 255

Query: 262 YALSERFIKSGLTAGGVKG 280
           +   +R    GL  G VKG
Sbjct: 256 FLALQRHYLQGLLLGSVKG 274