Pairwise Alignments

Query, 280 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 281 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  153 bits (387), Expect = 4e-42
 Identities = 87/269 (32%), Positives = 153/269 (56%), Gaps = 6/269 (2%)

Query: 14  YCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDY 73
           + G A   +I LFPF+  ++TS +      ++    LP +    +YV     M       
Sbjct: 17  FAGSAFACLICLFPFYYAIITSLRSGANLFTV--IWLPDEMNWGNYVTAL--MDNGIARS 72

Query: 74  FRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKII 133
             NS VV+ ++  + + + I  A+ALSR+RF GR  +  +   V MF  + ++  +F+++
Sbjct: 73  LFNSAVVATLTVGLCLLVSITAAFALSRIRFTGRKYLLFTILCVSMFPQVAVLSGMFELV 132

Query: 134 TALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVP 193
             +G+YD+  AL+++  T +LP  +++L ++   IP E+EEAA++DG +   II RI VP
Sbjct: 133 RFMGLYDSLGALVLSYTTFSLPFTIWVLTTFMKAIPVELEEAAIVDGASTWTIISRIFVP 192

Query: 194 LAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDY--IWGRMMAAS 251
           +    L++  +  F+ AWN+++FA  F+ S    T+PV ++ L  +  +   WG +MA+S
Sbjct: 193 IMGPSLVTTGLLAFIGAWNEFMFALTFVISGDKRTVPVAISMLQGSSQFELPWGAIMASS 252

Query: 252 LVTALPVVIMYALSERFIKSGLTAGGVKG 280
           ++  LP+V++  + +R I SGLT G VKG
Sbjct: 253 VIVTLPIVVLVLIFQRRIVSGLTNGAVKG 281