Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 311 a.a., sugar transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  134 bits (336), Expect = 3e-36
 Identities = 87/280 (31%), Positives = 142/280 (50%), Gaps = 8/280 (2%)

Query: 9   SDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVRILSDPG 68
           +D     L  AP+L+L+  ++  P+V  I  +F  + L       FVG+ ++  +  D  
Sbjct: 22  ADASAPYLYTAPALILIVTVMLVPLVLGISYAFRDIQLLNPFSGGFVGLDHFRALAQDQA 81

Query: 69  FWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWK 128
           F+ SL  T+W+T   V      GL +A+  ++ F  R  A++LV L +  PS      W 
Sbjct: 82  FFRSLRNTLWWTGASVFLQFAFGLILALLLDKPFHGRAIAQALVFLPWAVPSFLAGLNWA 141

Query: 129 YMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQT 188
           ++FN   G + +  +  L +  Q      +P  +    ++  IW   P+  I+ LA LQ 
Sbjct: 142 WLFNPVVGPLPH-WLFALGIMSQPTNILSDPQLAMWGPIVANIWWGIPFFAITLLAALQA 200

Query: 189 IDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLTT----- 243
           I + LYEAA +DGA   QRF  +TLP + P +A  + LRT+W+   FAD+ ++ T     
Sbjct: 201 IPRDLYEAASIDGAGPLQRFLSITLPFLAPTIAITILLRTVWI-SNFADLIIVMTNGGPA 259

Query: 244 -KVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILL 282
            +  I+  Y++  AF   D G A+AI++VL  ++ A  LL
Sbjct: 260 DRTQIVASYIFTQAFKRLDFGYASAIALVLLALLLAYSLL 299