Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 300 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  118 bits (296), Expect = 1e-31
 Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 12/294 (4%)

Query: 1   MNRLFSGRSD-MPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNP--NIESTFVGV 57
           M R+ S  +D   F + L++  L  L  L   P+V N+ +SF  + +    +    FVG 
Sbjct: 1   MKRILSSITDGRGFDIGLVSLPLAFLFVLSGLPLVYNVVMSFQEVDMFSLGSFSRPFVGF 60

Query: 58  SNYVRILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYV 117
            NY+ + + P  W  L  T  +    +AG  ++G  +A+FF   F      R L ++S+V
Sbjct: 61  KNYIDLFAQPETWPILLNTAIFVTASIAGQFLIGFGLALFFWVNFPGASWLRGLFLVSWV 120

Query: 118 TPSISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPY 177
            P + +   W ++ +  +G++N+L  +   + +    W  +P  S   V++  IW    +
Sbjct: 121 MPGLVVGAIWNWILSGDFGVLNFLLRETGVISDNI-FWRSDPNYSLWAVIIANIWLGTSF 179

Query: 178 AFISFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFAD 237
             I     L  I K LYEAAE+DGANA+QRF  +TLP +   +  +V L  I+    F D
Sbjct: 180 NMILLSVGLSGIPKDLYEAAELDGANAFQRFWTITLPMMRSTIGAIVALGLIFTLQQF-D 238

Query: 238 VYLLTTK------VDILGVYLYKTAFAFNDLGKAAAISVVLFI-IIFAVILLTR 284
           ++   T        ++   + +  +F   D  K A ISV++ + ++FA ++  R
Sbjct: 239 LFAAITSGGPNNTSNVTQYWAWDLSFRQYDFAKGATISVIMIVFVMFASVVYVR 292