Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 328 a.a., ABC transporter for D-trehalose/D-maltose/sucrose, permease component 1 (ThuF) (from data) from Sinorhizobium meliloti 1021

 Score =  146 bits (368), Expect = 7e-40
 Identities = 90/298 (30%), Positives = 153/298 (51%), Gaps = 19/298 (6%)

Query: 14  ALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNPNIESTFVGVSNYVR----------- 62
           A L LAP+ L+L  +  WP++  I  SF    L     + FVG +NY+            
Sbjct: 31  AWLFLAPTFLVLALVAGWPLIRTIYFSFTNASLTNLSGAEFVGFANYLSWITLKSGRTIY 90

Query: 63  --ILSDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPS 120
             +L+DP +W+++W T+ +T L V+  T LGL VA+  N +F  R   R+ +++ +  P+
Sbjct: 91  RGLLADPAWWNAVWNTLKFTVLSVSIETALGLIVALVLNAQFPGRGLVRAAILIPWAIPT 150

Query: 121 ISLVFAWKYMFNNGYGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFI 180
           I     W +M N+ +GI+N + +  L L  +   W  +P ++ +  ++  +W+  P+  +
Sbjct: 151 IVSAKMWAWMLNDQFGILNDMLIG-LGLIGEKIAWTASPDTAMIAELIVDVWKTTPFMAL 209

Query: 181 SFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYL 240
             LA LQ +   +YEAA++DG +  + F  VTLP I P L   V  R +    +F  +Y+
Sbjct: 210 LILAGLQMVPGDIYEAAKIDGVHPVRVFWRVTLPLIRPALMVAVIFRMLDALRIFDLIYV 269

Query: 241 LT---TKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTR--KRVNLNGNK 293
           LT    +   + V   +  F F+     AA S +LF+II  + +L     R+NL+G +
Sbjct: 270 LTPNNAQTKTMSVMARENLFDFDKFAYGAAASTMLFLIIATITILYMWLGRLNLSGGE 327