Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 290 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  138 bits (348), Expect = 1e-37
 Identities = 80/282 (28%), Positives = 154/282 (54%), Gaps = 13/282 (4%)

Query: 10  DMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLN-PNIESTFVGVSNYV-RILSDP 67
           D      L+ P+++++     WP++    +SF    LN P     ++G  NY      +P
Sbjct: 3   DNTLKYFLVLPAVVVVFATAIWPLIEAARMSFTVGRLNRPGSLEQYIGWENYAWAFFEEP 62

Query: 68  GFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAW 127
            FW+S+++T  YT + V  +T+L L +A+      RLR +A++L+IL +      +  ++
Sbjct: 63  AFWNSVYVTALYTVVTVGLTTLLALGLALLLAPGGRLRVSAQTLLILPFAMSPALIGVSF 122

Query: 128 KYMFNNGYGIVN-YLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAIL 186
           ++MFN  +G+ + + GV +  L + +  W  +P  +F +VV+  +W + P+  +  +  L
Sbjct: 123 RFMFNPEFGLFDAFFGVMIPPLADVS--WLADPTLAFAVVVMADVWGWIPFLTLVLIGGL 180

Query: 187 QTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT---- 242
            ++ +   EAA++DGA++W+ FR VTLP + PVLA V+ L++I+    F  V++LT    
Sbjct: 181 ASVPRDTIEAAQVDGASSWRVFRDVTLPQLGPVLAVVIILKSIFSLKTFDQVFMLTNGGP 240

Query: 243 -TKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLT 283
            T    L  Y+Y     +  +G +A+++   ++++  +I LT
Sbjct: 241 GTATQTLSHYIYFNGMKYGQIGYSASVA---WLMVIPMIFLT 279