Pairwise Alignments

Query, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

Subject, 318 a.a., ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  129 bits (323), Expect = 1e-34
 Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 14/293 (4%)

Query: 6   SGRSDMPFALLLLAPSLLLLGGLVAWPMVSNIEISFLRLPLN-PNIESTFVGVSNYVRIL 64
           +G SD   A L + P++LLL  +  +P++  + +SF     N P++ + FVG+ NYV IL
Sbjct: 25  AGLSDRTIAWLFILPTVLLLLAINIFPLIWALRLSFTNFKSNMPSVPARFVGIDNYVDIL 84

Query: 65  SDPGFWHSLWMTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLV 124
           +D   W+++ +T  +    V    +LG  +A+  NR+FR      +L++L  +     + 
Sbjct: 85  TDEDIWYAMQVTARFVFWSVGLEVLLGFGLALLINRQFRGHSFWTTLILLPMMLSPAVVG 144

Query: 125 FAWKYMFNNGYGIVNYLGVDLLHLYEQ-APLWFDNPGSSFVL---VVLFAIWRYFPYAFI 180
             W ++     G+ N    D++  +   AP  F   G   +    +V+   W + PY  +
Sbjct: 145 NFWTFLLQPQTGLFN----DIVGFFTGIAPGSFQMIGDVSLAPWTIVMVDTWMWTPYVML 200

Query: 181 SFLAILQTIDKSLYEAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYL 240
             LA L++I   +YEAAE+D A  W++F  +TLP  +P L   V  R I  F MF  V L
Sbjct: 201 ICLAGLRSIPDYIYEAAEVDRATPWRQFWSITLPMTLPFLMLAVLFRGIENFKMFDMVNL 260

Query: 241 LT-----TKVDILGVYLYKTAFAFNDLGKAAAISVVLFIIIFAVILLTRKRVN 288
           LT     +  + + + L + AF     G ++A++++LF+ +F    +  K +N
Sbjct: 261 LTSGGPGSVTETVSITLKRAAFEKWQTGYSSALAIILFVTVFGAANIYVKALN 313