Pairwise Alignments

Query, 306 a.a., oligopeptide permease ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

Subject, 306 a.a., oligopeptide ABC transporter permease OppB from Vibrio cholerae E7946 ATCC 55056

 Score =  423 bits (1087), Expect = e-123
 Identities = 208/306 (67%), Positives = 249/306 (81%)

Query: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM 60
           MLKFI +R  EAIPT+ +LITISFF+MR APG+PF+ ER LPPEVMANI AKY L+ P+ 
Sbjct: 1   MLKFIAKRIFEAIPTMLVLITISFFLMRYAPGNPFSSERPLPPEVMANINAKYGLDKPVS 60

Query: 61  TQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAA 120
            QY +YL  +  GDFGPSFKYKDY+VN+L+AS+ PVS K+G AAF   VI+GV+ G IAA
Sbjct: 61  EQYLTYLTNIVQGDFGPSFKYKDYTVNELIASALPVSVKIGLAAFVFTVIMGVTVGTIAA 120

Query: 121 LKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVA 180
           LKQNT  DYT+M  AM GVV+PSFV+AP+L+ IFAI     P GGW  G  ++M LP++ 
Sbjct: 121 LKQNTWIDYTIMSTAMLGVVMPSFVLAPVLIYIFAIQFSLFPAGGWQDGGFEYMALPVLG 180

Query: 181 LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF 240
           +SL Y+A+ ARITRGSMIE L+SNFIRTARAKGL    I+++HALKPALLPV+SYMGPAF
Sbjct: 181 MSLLYVATFARITRGSMIETLNSNFIRTARAKGLSYGYIVVKHALKPALLPVVSYMGPAF 240

Query: 241 VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI 300
           VGIITGS+VIETI+GLPGIG+LFVN A NRDYSLV+ +TIL+G L ILFNAIVD+L A I
Sbjct: 241 VGIITGSVVIETIFGLPGIGKLFVNAAFNRDYSLVMGVTILIGFLFILFNAIVDILLAYI 300

Query: 301 DPKIRY 306
           DPKIRY
Sbjct: 301 DPKIRY 306