Pairwise Alignments

Query, 306 a.a., oligopeptide permease ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

Subject, 334 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  196 bits (497), Expect = 8e-55
 Identities = 116/335 (34%), Positives = 181/335 (54%), Gaps = 30/335 (8%)

Query: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSP---FTGERTLPPEVMANIEAKYHLND 57
           M +F+L R    IPT   +  I+F  +RL PG P    +GER + PE  A I  +   + 
Sbjct: 1   MFRFLLGRLAVLIPTFIGVSIIAFSFIRLLPGDPVALLSGERVMSPERHAEISHQLGFDR 60

Query: 58  PIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGV 117
           PI+ QY  YL  +  GDFG S   K   V D     FP + +L   A   AV++G+ AGV
Sbjct: 61  PIVMQYLDYLWGVLQGDFGTSIVTKK-PVIDQFMELFPATVELSLCAIIFAVVVGIPAGV 119

Query: 118 IAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNG--------- 168
           +AA+K+ + +D  +MG A+ G  +P F    LL+++ + IL W P  G            
Sbjct: 120 VAAVKRGSIFDQIIMGTALIGFSMPIFWWGLLLIIVVSGILQWTPVSGRISLMFFFPSVT 179

Query: 169 -----------------GALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARA 211
                             A   +ILP + L    +A IAR TR +M+EVL  +++RTARA
Sbjct: 180 GFMLVDSLLSGQEGAFQSAFNHLILPTIVLGTIPLAVIARQTRSAMLEVLSEDYVRTARA 239

Query: 212 KGLPMRRIILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRD 271
           KGL   R++  HAL+ A++PV++ +G     ++ G+++ ETI+  PGIG+  V+    RD
Sbjct: 240 KGLSTFRVVGIHALRNAMIPVVTTIGLQIGVMLAGAILTETIFSWPGIGKWMVDSVFRRD 299

Query: 272 YSLVLSLTILVGALTILFNAIVDVLYAVIDPKIRY 306
           Y+++    +++ A+ +L N  VD+LY +I+P+IR+
Sbjct: 300 YAVIQGGLLIIAAVIMLVNLAVDLLYGLINPRIRH 334