Pairwise Alignments

Query, 306 a.a., oligopeptide permease ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

Subject, 313 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (510), Expect = 2e-56
 Identities = 112/311 (36%), Positives = 177/311 (56%), Gaps = 9/311 (2%)

Query: 4   FILRRCLEAIPTLFILITISFFMMRLAPGSPFTG--ERTLPPEVMANIEAKYHLNDPIMT 61
           F+LRR L  +P L ++  I F M+RLAPG P       T   E +A + A   L+DP+  
Sbjct: 4   FLLRRVLATLPVLVVVALIVFLMLRLAPGDPAAAIVGATGTAEDIARVRADLGLDDPMPV 63

Query: 62  QYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAAL 121
           Q+  +  Q+  GD G SF  K  +V  L+A     +  L A    + +++ V  GVIAA 
Sbjct: 64  QFVRWAGQMLQGDLGESFFMKQ-TVVALIAQRIEPTLSLSAMTLVMTILIAVPLGVIAAW 122

Query: 122 KQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGW------NGGALKFMI 175
           +     D  +MG ++ G  IP+FV+   L+ +FA+    LP  G+          L+ +I
Sbjct: 123 RHGGWLDRALMGFSVLGFSIPAFVIGYCLIWLFAMHWQMLPVQGYVRFGDDPSRWLRHLI 182

Query: 176 LPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSY 235
           +P V LS+ Y+A IAR+TR ++ E +  ++IRTARAKG+   R+++RHAL  A +P+++ 
Sbjct: 183 MPAVTLSIIYVALIARVTRAAVAEAMTEDYIRTARAKGISEVRVLMRHALANAAVPIVTV 242

Query: 236 MGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDV 295
           +G     +I G +V E ++ +PG+GQL V+  L+RD+ L+  +T+    L +L N  VD+
Sbjct: 243 IGIGVAMLIGGVVVTEAVFAIPGLGQLTVDAVLSRDFPLIQGITLFFSVLYMLINLAVDL 302

Query: 296 LYAVIDPKIRY 306
            Y + DP+IRY
Sbjct: 303 SYLLFDPRIRY 313