Pairwise Alignments

Query, 306 a.a., oligopeptide permease ABC transporter membrane protein (NCBI) from Escherichia coli BW25113

Subject, 308 a.a., Binding-protein-dependent transport systems inner membrane component (NCBI) from Rhodospirillum rubrum S1H

 Score =  352 bits (903), Expect = e-102
 Identities = 169/305 (55%), Positives = 228/305 (74%)

Query: 1   MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPEVMANIEAKYHLNDPIM 60
           ML+FIL+R + A+PTL ++IT++FFMMR+APG PF  ER LPPE+  NI A Y+L+ P++
Sbjct: 1   MLRFILKRLMIAVPTLLVIITVAFFMMRIAPGGPFDSERALPPEIEKNILAAYNLDKPLI 60

Query: 61  TQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGAAAFFLAVILGVSAGVIAA 120
            QY  YL  + HGDFGPSFK +D+SV++L+ +  P S +LG AA  LA+ +GV+ G +AA
Sbjct: 61  DQYALYLGGILHGDFGPSFKIRDFSVSELILAGAPASIQLGLAALILALSVGVTLGTLAA 120

Query: 121 LKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHWLPGGGWNGGALKFMILPMVA 180
           L QN   D+ VMG+AM G+VIP+FV+APLL ++  +    LP  GW  GAL++ ILP+ A
Sbjct: 121 LHQNEAGDFAVMGVAMVGIVIPNFVMAPLLSLVLGVYWGILPTSGWGDGALRYKILPIFA 180

Query: 181 LSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRRIILRHALKPALLPVLSYMGPAF 240
           L+L  IA IAR+TRGSM+EVL SNF+RTARAKGL  R +++RH LK  LLPV+SY+GPA 
Sbjct: 181 LALPQIAYIARLTRGSMVEVLRSNFVRTARAKGLGERLVVMRHTLKAGLLPVVSYLGPAA 240

Query: 241 VGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVLSLTILVGALTILFNAIVDVLYAVI 300
             + TGS+V+ETI+ +PGIG  FVN ALNRDY +V+ + I+  +L IL N  VD+LY +I
Sbjct: 241 AAVTTGSVVVETIFAVPGIGTYFVNAALNRDYPVVMGVVIVYASLIILLNLAVDLLYGLI 300

Query: 301 DPKIR 305
           DPK+R
Sbjct: 301 DPKLR 305