Pairwise Alignments

Query, 1247 a.a., nitrate reductase 1, alpha subunit (NCBI) from Escherichia coli BW25113

Subject, 1251 a.a., respiratory nitrate reductase, alpha subunit from Pseudomonas stutzeri RCH2

 Score = 1934 bits (5010), Expect = 0.0
 Identities = 905/1247 (72%), Positives = 1047/1247 (83%), Gaps = 6/1247 (0%)

Query: 1    MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDKIVRSTHGVNCTGSCSW 60
            MS  LD+ R+F +K   FADGHG+    +RDWE+ YR RWQ+DKIVRSTHGVNCTGSCSW
Sbjct: 1    MSHLLDQLRFFNRKQGEFADGHGETRIESRDWENVYRSRWQYDKIVRSTHGVNCTGSCSW 60

Query: 61   KIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWYLYSANRLKYPMMRKRLMK 120
            KIYVKNGL+TWETQQTDYPRTR DLPNHEPRGCPRGASYSWY+YSANRLKYP +RK L+K
Sbjct: 61   KIYVKNGLITWETQQTDYPRTRNDLPNHEPRGCPRGASYSWYIYSANRLKYPKVRKPLLK 120

Query: 121  MWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVRSSWQEVNELIAASNVYTIKN 180
            +WREA+  +  PV+AWASI+ED  KA+S+K  RG GGF+RSSW+EVNE+IAA+NVYT+K 
Sbjct: 121  LWREARR-NMSPVDAWASIVEDKAKAESYKSKRGMGGFIRSSWEEVNEIIAAANVYTVKQ 179

Query: 181  YGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFYDWYCDLPPASPQTWGEQTDVPE 240
            YGPDRV GFSPIPAMSMVSYA+G+RYLSLIGG CLSFYDWYCDLPPASPQ WGEQTDVPE
Sbjct: 180  YGPDRVVGFSPIPAMSMVSYAAGSRYLSLIGGVCLSFYDWYCDLPPASPQVWGEQTDVPE 239

Query: 241  SADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAPKQ 300
            SADWYNS+YIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVA+TPDYAE+AKL DLWL PKQ
Sbjct: 240  SADWYNSNYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAITPDYAEVAKLTDLWLNPKQ 299

Query: 301  GTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRYTDMPMLVMLEERDGYYAAGRMLRAAD 360
            GTDAA+A A  HV+ +EFHL+ PS YF DY +RYTD+P+LV L E+DG Y A R LRA+D
Sbjct: 300  GTDAALAQAFAHVIFKEFHLEKPSAYFRDYAKRYTDLPVLVRLNEKDGSYIADRFLRASD 359

Query: 361  LVDALGQENNPEWKTVAFN-TNGEMVAPNGSIGFRWGEKGKWNLEQRDGKTGEETELQLS 419
            L D LGQENNPEWKT+A + T GE+V+P GSIG+RWGEKGKWN+E R+GK G + +L L+
Sbjct: 360  LADNLGQENNPEWKTIAVDGTTGELVSPLGSIGYRWGEKGKWNIEAREGKDGRDVDLSLT 419

Query: 420  LLGSQDEIAEVGFPYFGGDGTEHFNKVELENVLLHKLPVKRLQLADGSTALVTTVYDLTL 479
             +    E AEV FPYFGG   EHF   E E++ L ++PV+ + LADGST  V TV+DL  
Sbjct: 420  QIDG-GETAEVAFPYFGGILHEHFQHAEGESIQLRRVPVRSITLADGSTTKVATVFDLMA 478

Query: 480  ANYGLERGLNDVNCATSYDDVKAY-TPAWAEQITGVSRSQIIRIAREFADNADKTHGRSM 538
            AN G++RGL   N A+SYDD     TPAW E ITGVSR + I+IAREFADNADKTHGRSM
Sbjct: 479  ANLGIDRGLGGANVASSYDDASVPGTPAWQEVITGVSREKAIQIAREFADNADKTHGRSM 538

Query: 539  IIVGAGLNHWYHLDMNYRGLINMLIFCGCVGQSGGGWAHYVGQEKLRPQTGWQPLAFALD 598
            IIVGA +NHWYH+DMNYRGLINML+ CGCVGQ+GGGWAHYVGQEKLRPQ GW PLAF LD
Sbjct: 539  IIVGAAMNHWYHMDMNYRGLINMLMLCGCVGQTGGGWAHYVGQEKLRPQCGWLPLAFGLD 598

Query: 599  WQRPARHMNSTSYFYNHSSQWRYETVTAEELLSPMADKSRYTGHLIDFNVRAERMGWLPS 658
            W RP R MN TS+FYNHSSQWR+E ++  E+LSP+ADKS++  H++D+N+RAER GWLPS
Sbjct: 599  WHRPPRQMNGTSFFYNHSSQWRHEKMSIHEVLSPLADKSQFPEHMLDYNIRAERAGWLPS 658

Query: 659  APQLGTNPLTIAGEAEKAGMNPVDYTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLL 718
            APQL  NPL I  EAE AGM+PVDY  +SLK+GS++FA EQP+N  N PRN+FIWRSNLL
Sbjct: 659  APQLNRNPLQICREAEAAGMSPVDYVTQSLKDGSLKFACEQPDNPDNFPRNMFIWRSNLL 718

Query: 719  GSSGKGHEFMLKYLLGTEHGIQGKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSS 778
            GSSGKGHE+MLKYLLGT++G+  +DLG++ G KP E +WQ++G  GKLDLV TLDFR+SS
Sbjct: 719  GSSGKGHEYMLKYLLGTKNGVMNEDLGKRDGFKPLEAEWQEDGAIGKLDLVTTLDFRMSS 778

Query: 779  TCLYSDIILPTATWYEKDDMNTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVC 838
            TC+YSDI+LPTATWYEKDDMNTSDMHPFIHPLSAA+DPAWEA+SDWEIYK IAK FS++ 
Sbjct: 779  TCVYSDIVLPTATWYEKDDMNTSDMHPFIHPLSAAIDPAWEARSDWEIYKGIAKSFSKMA 838

Query: 839  VGHLGKETDIVTLPIQHDSAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERDYPATYE 898
             GHLG E D+VT+P+ HDS  ELAQP    DWK    D  PGK  P++ VVERDYPATY+
Sbjct: 839  EGHLGVEKDLVTVPLLHDSPGELAQPFGGTDWKTAGVDPQPGKNCPNMTVVERDYPATYK 898

Query: 899  RFTSIGPLMEKIGNGGKGIAWNTQSEMDLLRKLNY-TKAEGPAKGQPMLNTAIDAAEMIL 957
            +F+S+GPL++K+GNGGKGI WNTQ E+D L +LNY  + EG ++G+P + +AIDAAE+IL
Sbjct: 899  KFSSLGPLLDKLGNGGKGINWNTQDEVDFLGELNYKVRDEGVSQGRPQIESAIDAAEVIL 958

Query: 958  TLAPETNGQVAVKAWAALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLE 1017
            +LAPETNG VAVKAWAALSEFTGRDH+HLAL KE E IRFRDIQAQPRKIISSPTWSGLE
Sbjct: 959  SLAPETNGHVAVKAWAALSEFTGRDHSHLALPKEHEAIRFRDIQAQPRKIISSPTWSGLE 1018

Query: 1018 DEHVSYNAGYTNVHELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQ 1077
            DEHVSYNAGYTNVHE IPWRT++GRQQ +QDH WM+ FGE L+ YRPPI+TR++  V G+
Sbjct: 1019 DEHVSYNAGYTNVHEYIPWRTITGRQQFFQDHPWMQAFGEQLMSYRPPINTRTIDYVKGK 1078

Query: 1078 KSNGNQEKALNFLTPHQKWGIHSTYSDNLLMLTLGRGGPVVWLSEADAKDLGIADNDWIE 1137
            KSNGN E  LN++TPHQKWGIHSTYSDNL+MLTL RGGP+VW+SE DAK  GI DNDWIE
Sbjct: 1079 KSNGNTEIVLNWITPHQKWGIHSTYSDNLIMLTLSRGGPIVWMSEVDAKKAGIEDNDWIE 1138

Query: 1138 VFNSNGALTARAVVSQRVPAGMTMMYHAQERIVNLPGSEITQQRGGIHNSVTRITPKPTH 1197
             FN+NGALTARAVVSQRV  GM MMYHAQERIVN+PGSE T+ RGG HNSVTR+  KPTH
Sbjct: 1139 CFNANGALTARAVVSQRVMEGMVMMYHAQERIVNVPGSETTKTRGGHHNSVTRVVLKPTH 1198

Query: 1198 MIGGYAHLAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDG-EGNDQVQ 1243
            MIGGYA  AYGFNYYGTVG NRDEFVVVRKM  +DWLDG  GND  Q
Sbjct: 1199 MIGGYAQQAYGFNYYGTVGCNRDEFVVVRKMAKVDWLDGPNGNDLPQ 1245