Pairwise Alignments

Query, 194 a.a., peptidyl-tRNA hydrolase (NCBI) from Escherichia coli BW25113

Subject, 202 a.a., peptidyl-tRNA hydrolase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  153 bits (386), Expect = 2e-42
 Identities = 90/199 (45%), Positives = 115/199 (57%), Gaps = 15/199 (7%)

Query: 5   LIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLRE-----------EAKFFGYTSRVT 53
           LIVGL NPG EY  TRHN G   VD L E   A  RE           + K+  +  R+T
Sbjct: 6   LIVGLGNPGKEYERTRHNLGFMAVDALME---AAARETGGGCDQLSGGKKKYDLWRCRIT 62

Query: 54  LGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGVAKFKLGGGHGG 113
             G+   +  P TFMNLSG+AV A+AS++RI PD ILV HDELD+P G  KFK GGG+ G
Sbjct: 63  PTGDPWLVAKPQTFMNLSGEAVLAIASYYRIKPDAILVVHDELDIPLGRMKFKTGGGNAG 122

Query: 114 HNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQKLIDEAIDEAARCT 173
           HNGLK I   LG  P+FHRLR+GIG      +   +VLG+    EQ L+D  +  A +  
Sbjct: 123 HNGLKSITQLLG-TPDFHRLRLGIGRSPHGGETTNWVLGRLSGPEQTLLDTLLPAAVQAM 181

Query: 174 EMWFTDGLTKATNRLHAFK 192
            ++ + G   AT   +A+K
Sbjct: 182 TIFASQGAAAATQFANAYK 200