Pairwise Alignments

Query, 363 a.a., translation-associated GTPase (NCBI) from Escherichia coli BW25113

Subject, 366 a.a., GTP-dependent nucleic acid-binding protein EngD (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  362 bits (928), Expect = e-104
 Identities = 190/368 (51%), Positives = 251/368 (68%), Gaps = 7/368 (1%)

Query: 1   MGFKCGIVGLPNVGKSTLFNALTKA-GIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVK 59
           M    GIVGLPNVGKSTLFNALTKA   EAAN+PFCTIEPN   V +PD R+D+L E+ K
Sbjct: 1   MALSIGIVGLPNVGKSTLFNALTKAQNAEAANYPFCTIEPNKATVAVPDARIDKLTEMAK 60

Query: 60  PQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKV 119
           PQ+T+  T++F+DIAGLV+GASKGEGLGNQFL NIRE  AI  VVRCF+++NI HV G +
Sbjct: 61  PQKTISATVDFIDIAGLVRGASKGEGLGNQFLANIRECAAILEVVRCFDDENITHVDGAI 120

Query: 120 NPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKAELAVLEKCLPQLENAGMLR 179
           +P  DIE I TEL LAD+ + E+   R+ K +K  DKDAKA    L + L  + NAG   
Sbjct: 121 DPIRDIETIETELLLADIQSAEKRYDRLSKMSK-FDKDAKAASDELGRLLEHM-NAGNPA 178

Query: 180 ALDLSAEE---KAAIRYLSFLTLKPTMYIANVNEDGFE-NNPYLDQVREIAAKEGSVVVP 235
           +     +    K A+R +  +T K  +Y ANV+E   +  N ++ +VRE+A + G  +V 
Sbjct: 179 STFEGKDNDLFKQAMREMGLITAKKVIYCANVDEANLDGTNDHVRRVRELAEQRGCDMVV 238

Query: 236 VCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTI 295
           +CA +E ++  L DEE+ E +   G++E GL  +IR GY  L L +YFT G KEVRAWTI
Sbjct: 239 ICAKIEEELQGLSDEEQAEMLASYGIKESGLVSIIRTGYHTLGLASYFTVGEKEVRAWTI 298

Query: 296 PVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGD 355
             G  AP  AG IHTDFE+GFIRA+ I ++D++ +  E   + AG +R EGK+Y++KDGD
Sbjct: 299 QQGWKAPACAGVIHTDFERGFIRAEVIGYDDYVKHGTEAACRSAGVLRVEGKEYVMKDGD 358

Query: 356 VMNFLFNV 363
           V++FLFNV
Sbjct: 359 VVHFLFNV 366