Pairwise Alignments

Query, 363 a.a., translation-associated GTPase (NCBI) from Escherichia coli BW25113

Subject, 367 a.a., GTP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  410 bits (1054), Expect = e-119
 Identities = 213/367 (58%), Positives = 266/367 (72%), Gaps = 4/367 (1%)

Query: 1   MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVVPMPDPRLDQLAEIVKP 60
           M  +CGIVGLPNVGKSTLFN L+ A  +AANFPFCTIEPN GV+ +PD RL+ LAE+V P
Sbjct: 1   MALQCGIVGLPNVGKSTLFNCLSNAKAQAANFPFCTIEPNVGVITVPDERLNALAELVHP 60

Query: 61  QRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGHVVRCFENDNIIHVSGKVN 120
           QR +PTT+E VDIAGLVKGASKGEGLGN+FL NIRET+AI HV+RCF++DN+ HV G VN
Sbjct: 61  QRIVPTTVEIVDIAGLVKGASKGEGLGNKFLANIRETDAIIHVLRCFDDDNVTHVDGSVN 120

Query: 121 PADDIEVINTELALADLDTCERAIHRVQKKAK-GGDKDAKAELAVLEKCLPQLENAGMLR 179
           P  D E+I+ EL L DL+T E  I +VQK+A+ GGDK AK    VL +    LE     R
Sbjct: 121 PVRDKEIIDYELQLKDLETIESRIQKVQKQAQTGGDKAAKQAYDVLIQYKDALEQGKSAR 180

Query: 180 ALDLSAEEKAAIRY-LSFLTLKPTMYIANVNEDGFEN-NPYLDQVREIAAKEGSVVVPVC 237
            +    +++  I + L  LT KP MY+ NV+E    N N Y+D VRE    E + ++ V 
Sbjct: 181 TVTFETKDEQKIAHELFLLTSKPVMYVCNVDEASAVNGNKYVDMVREAVKDENAEILVVA 240

Query: 238 AAVEADIAELDD-EERDEFMQELGLEEPGLNRVIRAGYKLLNLQTYFTAGVKEVRAWTIP 296
           A  EADIAEL+  E+R  F+ E+GLEE G+ R+I++ YKLLNL+TYFTAGV+EVRAWT  
Sbjct: 241 AKTEADIAELETYEDRQMFLAEVGLEESGVARLIKSAYKLLNLETYFTAGVQEVRAWTYE 300

Query: 297 VGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQGAKEAGKMRAEGKDYIVKDGDV 356
            G  APQ AG IHTDFEKGFIRA+ I ++D+I Y  E   KEAGK+  EGK+Y+V+DGD+
Sbjct: 301 KGWKAPQCAGVIHTDFEKGFIRAEVIKYDDYIQYGSEAAVKEAGKLGVEGKEYVVQDGDI 360

Query: 357 MNFLFNV 363
           M+F FNV
Sbjct: 361 MHFRFNV 367