Pairwise Alignments

Query, 578 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 581 a.a., K+/H+ antiporter NhaP2 from Vibrio cholerae E7946 ATCC 55056

 Score =  701 bits (1808), Expect = 0.0
 Identities = 354/576 (61%), Positives = 457/576 (79%), Gaps = 3/576 (0%)

Query: 1   MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPF 60
           MDA TI S F++G++L+  S+LLS  SS+LGIPIL++FLA+GMLAG DG+G I FDNYP 
Sbjct: 1   MDAVTINSFFMIGALLIGISVLLSPVSSKLGIPILLVFLAVGMLAGEDGIGQIAFDNYPV 60

Query: 61  AYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLI 120
           AY+VSNLALAIILLDGGMRT+ +SFRVA  P++SLATLGV +T+ LTG++A WLFNL L+
Sbjct: 61  AYLVSNLALAIILLDGGMRTRVASFRVAFWPSVSLATLGVAVTTLLTGLLAMWLFNLSLL 120

Query: 121 EGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGSNDPMAVFLTITLIAMIQHHE 180
           +G+L+GAIVGSTDAAAVFSLL G+ LNERVG+TLEIESG+NDPMAVFLT+TLIA++   E
Sbjct: 121 QGVLVGAIVGSTDAAAVFSLLKGRSLNERVGATLEIESGTNDPMAVFLTVTLIAVLGSAE 180

Query: 181 SNISWMFIV-DILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTT 239
           +N+S  F++   +QQFG+G ++GL GG++L  +INR  LP GLY +LA+SGG++IF+L+ 
Sbjct: 181 TNLSAGFLLLSFIQQFGVGALLGLAGGWILWWLINRNQLPEGLYSILAVSGGLMIFALSN 240

Query: 240 ALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIA 299
           AL GSGIL++YL G LLGNRP R+R+ IL   DG+ WLAQI MFLVLGLLV PS+L+ IA
Sbjct: 241 ALGGSGILSIYLTGLLLGNRPTRSRHAILNVLDGMTWLAQIGMFLVLGLLVTPSELMEIA 300

Query: 300 IPALILSAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLE 359
           +P L L+  MI FARP++V+ GL PF+ F  RE+ F+SWVGLRGAVPIILAVFPMMAGL 
Sbjct: 301 LPGLALAVGMILFARPIAVWIGLAPFKSFTAREKWFVSWVGLRGAVPIILAVFPMMAGLP 360

Query: 360 NARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVY 419
           NA+L+FN+AFFVV+VSL++QG +L+ A   AKV +PP   P+SR G++I+P + WE F+Y
Sbjct: 361 NAQLYFNLAFFVVMVSLVVQGGTLTKAMSLAKVELPPKPEPISRTGVEIYPTSEWELFIY 420

Query: 420 QLSADKWCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPAL 479
           +L ADKWC+G  LR+L MP+ TRIAA+FRDNQLLHP+GST L EGD LCV+ +ERDL +L
Sbjct: 421 KLKADKWCIGEPLRNLFMPEGTRIAAVFRDNQLLHPSGSTELCEGDTLCVMAQERDLESL 480

Query: 480 GKLFSQSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGA 539
            +LFS++P  A   RFFGDF L+  AK  DVAL+YGL+ G    D +  L ++V + LG 
Sbjct: 481 SRLFSEAPEKASLARFFGDFFLDIEAKLQDVALLYGLDLGELEADAK--LKDLVLEHLGE 538

Query: 540 APVVGDQVEFAGMIWTVAEKEDNEVLKIGVRVAEEE 575
            PV+GD  E+ G+ W VA+  D +V KIG+R+  EE
Sbjct: 539 TPVLGDYFEWHGLQWVVADVVDWKVTKIGLRLPPEE 574