Pairwise Alignments

Query, 578 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 574 a.a., sodium/hydrogen exchanger from Marinobacter adhaerens HP15

 Score =  489 bits (1258), Expect = e-142
 Identities = 264/568 (46%), Positives = 371/568 (65%), Gaps = 7/568 (1%)

Query: 8   SLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGMLAGVDGVGGIPFDNYPFAYMVSNL 67
           +L ++G++++  SI+LS  SSR+G+P+L+IFL +GM+ G DG GGI FD++  A++++NL
Sbjct: 4   TLTLIGALMLVISIVLSPLSSRVGMPVLLIFLVVGMMMGEDGPGGIQFDDFELAFLIANL 63

Query: 68  ALAIILLDGGMRTQASSFRVALGPALSLATLGVLITSGLTGMMAAWLFNLDLIEGLLIGA 127
           AL +ILLDGGMRT+A +FRV L PAL LATLGV +T+    ++A W+F+L  +  LLIGA
Sbjct: 64  ALGVILLDGGMRTRAETFRVGLKPALVLATLGVAMTAAGAAVVAWWVFDLHWLTALLIGA 123

Query: 128 IVGSTDAAAVFSLLGGKGL--NERVGSTLEIESGSNDPMAVFLTITLIAMIQHHESNISW 185
           I+ STDAAAVFSLL G+GL  NERV +TLEIESGSNDPMA+FLT+ L+ +I +   +  W
Sbjct: 124 IISSTDAAAVFSLLQGRGLHLNERVSATLEIESGSNDPMAIFLTLMLVTLIGNDGDHAGW 183

Query: 186 MFIVDILQQFGLGIVIGLGGGYLLLQMINRIALPAGLYPLLALSGGILIFSLTTALEGSG 245
             +  ++QQFG+G V G+ GG+ ++++ NRI L   LYPLL  + GI +FS T AL GSG
Sbjct: 184 AVLTMLVQQFGVGAVAGIIGGFAVVELANRIRLTPSLYPLLVAAAGISVFSATNALGGSG 243

Query: 246 ILAVYLCGFLLGNRPIRNRYGILQNFDGLAWLAQIAMFLVLGLLVNPSDLLPIAIPALIL 305
            LA+YL G ++GNR +R    ILQ  DGLAWLAQ+ +FL+LGLLV PSDL+P+A   LIL
Sbjct: 244 FLAIYLTGVVIGNRHVRMMPMILQVHDGLAWLAQLCLFLMLGLLVTPSDLIPLAGGGLIL 303

Query: 306 SAWMIFFARPLSVFAGLLPFRGFNLRERVFISWVGLRGAVPIILAVFPMMAGLENARLFF 365
           +  +IF  RPL+V   L PF  FN RE  FISWVGLRGAVPI+LA+FP++A L  A+L F
Sbjct: 304 ALSLIFIIRPLTVMLTLWPF-AFNRRELGFISWVGLRGAVPIVLALFPIIADLPEAQLVF 362

Query: 366 NVAFFVVLVSLLLQGTSLSWAAKKAKVVVPPVGRPVSRVGLDIHPENPWEQFVYQLSADK 425
           + AFF+VLVSLL+QGT+++  A+K ++ VP    P  R+ LD       E  ++ L  + 
Sbjct: 363 HAAFFIVLVSLLVQGTTMTPLARKLRLEVPAGEDPYRRLPLDAPAAGDHELMLFPLRGEI 422

Query: 426 WCVGAALRDLHMPKETRIAALFRDNQLLHPTGSTRLREGDVLCVIGRERDLPALGKLFS- 484
           W     L  L +P+ T +A +FR+   L P     +  GD++ +      LP LGK  S 
Sbjct: 423 WETPRRLSQLRLPENTAVAGVFRNRVCLQPKADLEVSSGDMVAMFATPSVLPELGKALSG 482

Query: 485 -QSPPVALDQRFFGDFILEASAKYADVALIYGLEDGREYRDKQQTLGEIVQQLLGAAPVV 543
             +P    ++ FFGDF+L   A   DV  +YG+E   +    + +L E   +     PVV
Sbjct: 483 RHAPKYLAERAFFGDFVLNGDALLGDVEQVYGIE--FDDLPPELSLAECFARRTKGHPVV 540

Query: 544 GDQVEFAGMIWTVAEKEDNEVLKIGVRV 571
           GD V    +         ++V K+G+++
Sbjct: 541 GDVVTLGPVTLVARATSADQVTKVGLKM 568