Pairwise Alignments

Query, 422 a.a., DNA polymerase V subunit UmuC (NCBI) from Escherichia coli BW25113

Subject, 431 a.a., DNA polymerase IV from Rhodopseudomonas palustris CGA009

 Score = 87.4 bits (215), Expect = 7e-22
 Identities = 81/300 (27%), Positives = 131/300 (43%), Gaps = 23/300 (7%)

Query: 6   DVNAFYASCETVFRPDLWGKPVVVLSNNDGCVIARNAEAKALGVKMGDPWFKQKDLFRRC 65
           D +AFYA+ E    P L  KPV+V     G V A    A+  GV+   P FK   L    
Sbjct: 52  DCDAFYATVEKRDNPALADKPVIVGGGKRGVVSAACYIARTFGVRSAMPMFKALALCPSA 111

Query: 66  GVVCFSSNYELYADMSNRVMSTLEELSPRVEIYSIDEAFCDLTGVRN------CRDLTDF 119
            VV    +   Y  +   V   +  L+P VE  SIDEAF DL G          + L  F
Sbjct: 112 TVV--RPDMAKYVRVGREVRQAMRALTPLVEPLSIDEAFLDLAGTERMHGMIPAKVLAKF 169

Query: 120 GREIRATVLQRTHLTVGVGIAQTKTLAKLANHAAKKWQRQTGGVVDLSNLERQRKLMSAL 179
            RE+   +     +T  VG++  K LAK+A+   K       G   L   +  R++++  
Sbjct: 170 AREVERDI----GVTASVGLSCNKFLAKIASDLDK-----PRGFAALDQ-DEAREMLAPR 219

Query: 180 PVDDVWGIGRRISKKLDAMGIKTVLDLADTDIRFIRKHFNVVLERTVRELRGEPCLQLEE 239
           PV  ++G+G   + +L + G +T+ DL   D   + + F     R  R  RG   +   +
Sbjct: 220 PVGFIFGVGPATASRLASRGFRTIADLQRADEIELMRQFGDEGRRLWRLARG---IDDRK 276

Query: 240 FAPTK--QEIICSRSFGERITDYPSMRQAICSYAARAAEKLRSEHQYCRFISTFIKTSPF 297
             P +  + I    +F + I D  ++ + +   + + + +L+S       I+  +KT+ F
Sbjct: 277 VVPDRGAKSISNETTFEDDIRDLATLEKILWRLSEKVSSRLKSAALSGSTITLKLKTADF 336