Pairwise Alignments

Query, 233 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

Subject, 243 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  202 bits (515), Expect = 4e-57
 Identities = 107/225 (47%), Positives = 153/225 (68%), Gaps = 4/225 (1%)

Query: 5   LLQCDNLCKRYQEGS-VQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTS 63
           +L+ D + K +  G+ ++T+VLH +  S+  GE+ A++G SGSGKSTLL+L+G LD P+S
Sbjct: 13  VLRLDQVRKAFNVGTPLETEVLHGIDLSLYRGELAALIGPSGSGKSTLLNLIGLLDAPSS 72

Query: 64  GDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLI--GKKKPAE 121
           G++   GQ         +  LRNQ +GF++QFHHL+  F+ LENV MPL+I  GK  PA+
Sbjct: 73  GELYLLGQATRDSDDETRTHLRNQAIGFVFQFHHLISAFSVLENVLMPLMIRHGKPSPAD 132

Query: 122 INSRALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNA 181
           I   A  +L  VGL   A+ +P+++SGG++QRVAIARALV  P L+LADEPTGNLD R A
Sbjct: 133 I-ELARGLLDEVGLGAFADKKPTQISGGQQQRVAIARALVTRPPLLLADEPTGNLDTRTA 191

Query: 182 DSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAE 226
            S+F+L   +N   G A LVVTHD +LA   +R +++ DG + ++
Sbjct: 192 QSVFELFHRINAQFGCAVLVVTHDPRLAADCARTIQLVDGHIVSD 236