Pairwise Alignments

Query, 233 a.a., putative ATP-binding component of a transport system (VIMSS) from Escherichia coli BW25113

Subject, 236 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  239 bits (610), Expect = 3e-68
 Identities = 125/221 (56%), Positives = 154/221 (69%)

Query: 5   LLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSG 64
           +L    L K + +G     VL NV   V  GE +AIVG+SGSGKSTLLHLLGGLDTP+SG
Sbjct: 11  VLAARGLGKTFTQGKYSVKVLGNVDIDVYHGEQVAIVGASGSGKSTLLHLLGGLDTPSSG 70

Query: 65  DVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS 124
            V   G+  + L  + +  LRNQ LGF+YQFHHLLP+F+AL+NVAMPL+I + K A+   
Sbjct: 71  TVSLLGKDFASLGESERGALRNQSLGFVYQFHHLLPEFSALDNVAMPLMIRRVKRADAQE 130

Query: 125 RALEMLKAVGLDHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSI 184
           +A EML  VGL  R  H P ELSGGERQRVA+ARALV +P  VLADEPTGNLD   AD  
Sbjct: 131 QAREMLGKVGLAQRVTHVPGELSGGERQRVALARALVTHPACVLADEPTGNLDRSTADRT 190

Query: 185 FQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTA 225
           F+L+ EL+R  GTAF++VTHD++LA R  R L + +  L A
Sbjct: 191 FELMIELSRTLGTAFVIVTHDIELAGRCGRVLRLSEQGLQA 231