Pairwise Alignments

Query, 319 a.a., 23S rRNA pseudouridylate synthase (NCBI) from Escherichia coli BW25113

Subject, 352 a.a., pseudouridine synthase, RluA family from Marinobacter adhaerens HP15

 Score =  322 bits (824), Expect = 1e-92
 Identities = 166/308 (53%), Positives = 220/308 (71%), Gaps = 3/308 (0%)

Query: 8   VKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVR 67
           V+ V +  D  GQR+DNFL  QL+GVPKS+IYR++RKGEVRVNK R+KP+ ++  GD+VR
Sbjct: 39  VQWVTVDEDNEGQRVDNFLLAQLRGVPKSIIYRVIRKGEVRVNKGRVKPDSRVRTGDQVR 98

Query: 68  IPPVRVAEREEEAVSPHLQKVAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGL 127
           IPP+   E+ ++ V+P  +    +   +++E++ +LV+NKPSG AVHGGSGLSFG+IE L
Sbjct: 99  IPPITRKEKPDQ-VAPGSRVQGVMESAVVFENEQMLVVNKPSGIAVHGGSGLSFGLIEVL 157

Query: 128 RALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSH 187
           R+ RP A+FLELVHRLDRDTSG+++VAKKRSALR L ++LR+K ++K Y ALV G W + 
Sbjct: 158 RSARPTAKFLELVHRLDRDTSGLIMVAKKRSALRYLQDELRQKRIRKHYHALVAGDWPAS 217

Query: 188 VKSVQAPLLKNILQSGERIVRVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVH 247
           V  V  PLL+  + +GER V+V   GK S T F+  E YA  +LV  SP+TGRTHQIRVH
Sbjct: 218 VDRVDVPLLRYEMPNGERRVKVDAAGKASLTTFRCLEHYAGYSLVEASPITGRTHQIRVH 277

Query: 248 TQYAGHPIAFDDRYGDREFDRQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEG 307
           + +AGHPIA DD+Y D    +     G    RL LHA AL+FT P +GE MR+EAP D+ 
Sbjct: 278 SAWAGHPIAGDDKYMDDVSLKAFRSIGG--QRLMLHARALEFTLPVSGEAMRLEAPYDDA 335

Query: 308 LKRCLQKL 315
               L+KL
Sbjct: 336 FNDVLRKL 343