Pairwise Alignments

Query, 319 a.a., 23S rRNA pseudouridylate synthase (NCBI) from Escherichia coli BW25113

Subject, 302 a.a., RluA family pseudouridine synthase from Dyella japonica UNC79MFTsu3.2

 Score =  265 bits (677), Expect = 1e-75
 Identities = 149/288 (51%), Positives = 187/288 (64%), Gaps = 5/288 (1%)

Query: 28  TQLKGVPKSMIYRILRKGEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQK 87
           T LKGVPKSMIYR+LR G+VRVN KR KPE +L AGD +RIPPVR+A  +     P    
Sbjct: 2   TLLKGVPKSMIYRLLRTGQVRVNGKRAKPETRLTAGDMLRIPPVRMAPEKTGEQPPSAGL 61

Query: 88  VAALADVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDT 147
           + A+A+ +++ED H LV++KP+G A HGGSG+S G IE LRA RP    LELVHRLDRDT
Sbjct: 62  IDAVAEAVIFEDKHFLVIDKPAGIASHGGSGVSHGAIELLRAARPNEH-LELVHRLDRDT 120

Query: 148 SGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGQWQSHVKSVQAPLLKNILQSGERIV 207
           SGVL+ A+ R+ L  L   +R   + K YL L+ G        V APLLK++LQ GER+V
Sbjct: 121 SGVLVFARTRAGLTGLQALIRSNEVTKQYLCLMVGHPNKAKFDVNAPLLKSVLQGGERMV 180

Query: 208 RVSQEGKPSETRFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFD 267
           RVS  GK S T F+  E+Y  A L++ +  TGRTHQIRVH  + GHP+A D +YGD+E +
Sbjct: 181 RVSDNGKASLTFFREMEQYPGARLMQATLGTGRTHQIRVHAAHVGHPLAGDAKYGDKEAN 240

Query: 268 RQLTEAGTGLNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKL 315
           ++  E   GL RLFLHAA L F     G      AP+ E LK  L  L
Sbjct: 241 KRFRE--LGLQRLFLHAAHLSFEL--DGRAYGFSAPLPEDLKNFLDVL 284