Pairwise Alignments
Query, 1061 a.a., fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) from Escherichia coli BW25113
Subject, 920 a.a., ribonuclease, Rne/Rng family from Dechlorosoma suillum PS
Score = 690 bits (1780), Expect = 0.0
Identities = 444/1036 (42%), Positives = 591/1036 (57%), Gaps = 138/1036 (13%)
Query: 1 MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY 60
MKRML NATQ EELRVA+VDGQ+L DLDIES EQ+K+NIYKG ITRIEPSLEA FV+Y
Sbjct: 1 MKRMLFNATQAEELRVAIVDGQKLIDLDIESAAKEQRKSNIYKGVITRIEPSLEACFVNY 60
Query: 61 GAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI 120
G ERHGFLP KE++R YF R +IK+ L+EGQEVIVQ++K+ERGNKGAALTTF+
Sbjct: 61 GEERHGFLPFKEVSRSYFQPGVD--NRASIKEALKEGQEVIVQVEKDERGNKGAALTTFV 118
Query: 121 SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPEGMGLIVRTAGVGKSAEAL 180
SLAG YLVLMPNNPR GG+SRR+EGD+R EL++ + L++P GM LI RTA +G++AE L
Sbjct: 119 SLAGRYLVLMPNNPRGGGVSRRVEGDERAELRDVMDQLQVPGGMSLIARTAAIGRNAEEL 178
Query: 181 QWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA 240
QWDL++ LK WEAI+ AA S+ PFLI+ E ++++RA RDY + DIGEILID ++ E A
Sbjct: 179 QWDLNYLLKLWEAIEGAATSQSGPFLIYLEGSLVIRAIRDYFQPDIGEILIDTDEIFEQA 238
Query: 241 RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT 300
R + + P +++KLY ++PLFS +QIE QIESA+ R+V LPSGG+IVID TEAL
Sbjct: 239 RSFMGTV-MPANENRVKLYRDDVPLFSRFQIEHQIESAYSRQVNLPSGGAIVIDHTEALV 297
Query: 301 AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE 360
++D+NS R+TRG DIEETA TN EAADEIARQLRLRDLGGLIVIDFIDM ++QR VE
Sbjct: 298 SVDVNSGRSTRGQDIEETALKTNQEAADEIARQLRLRDLGGLIVIDFIDMESQKNQREVE 357
Query: 361 NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS 420
NRLR+A+R DRAR+Q+ ISRFGL+E+SRQRL P+L E+S+ CPRC+GTG +R ES +
Sbjct: 358 NRLRDALRHDRARVQMGKISRFGLMELSRQRLRPALAETSYIPCPRCTGTGHIRSTESAA 417
Query: 421 LSILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNAIETRQDGVRCVIVPNDQME 480
L ILR++EEEA+K+NT VH VPV +A++LLNEKR + AIE R V +++PN +E
Sbjct: 418 LHILRILEEEAMKDNTAAVHTQVPVDVATFLLNEKRPDIQAIELRHK-VTILLIPNVHLE 476
Query: 481 TPHYHVLRVR----KGEETPTLSY-MLPKLHEEAMALPSEEEFAERKRPEQPALATFAMP 535
TP + + R+R E+ SY M+ EE L + + +E ++P Q A P
Sbjct: 477 TPAHTIQRLRHDDLNNEDVQQPSYRMMEMPAEEVKQLANAQ--SEARQPRQEAAIKHITP 534
Query: 536 DVPPAPTPAEPAAPVVAPAPKAAPATPAAPAQPGLLSRFFGALKALFSGGEETKPTEQPA 595
+ P APVVA P AAP + G++ + F + F G + +PT +PA
Sbjct: 535 EQP---------APVVAEKPAAAPVAKS----EGIIGKIF----SWFRGNKTVEPTPEPA 577
Query: 596 PKAEAKPERQQDRRKPRQ--NNRRDRNERRDTRSERTEGSDNREENRRNRRQAQQQTAET 653
A P + + +R Q +R R R EG++ R R R + +T
Sbjct: 578 ----ATPRKGRGQRSEGQGRGEQRGRGRGEQRGRGRGEGAEGRNGGERGERPTRGET--- 630
Query: 654 RESRQQAEVTEKARTADEQQAPRRERSRRRNDDKRQAQQEAKALNVEEQSVQETEQEERV 713
+ A EQQ PR R +R + R ++ E+ Q+ EQ +
Sbjct: 631 -----------QGDNAREQQ-PREGRRQRGDRGDRNGERNNAVQADNERGEQQNEQRKER 678
Query: 714 RPVQPRRKQRQLNQKVRYEQSVAEEAVVAPVVEETVAAEPIVQEAPAPRTELVKVPLPVV 773
R QPRR+ R + A++AV A +A A T+
Sbjct: 679 RERQPRRE--------RNSEDKAQQAVAA--------------QADALNTQ--------A 708
Query: 774 AQTAPEQQEENNADNRDNGGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACA 833
A TAPEQ + GG RR RR+ R R G+RR+ E Q+ +
Sbjct: 709 AGTAPEQAA---PQGDEEGGRGRRGRRNNR--RDRGERRQENGAEGEVQQNAVTEVSQEQ 763
Query: 834 SPELASGKVWIRYPIVRPQDVQVEEQREQEEVHVQPMVTEVPVAAAIEPVVS-APVVEEV 892
+P +A+ V + P+ E V V + P A +E AP VEE
Sbjct: 764 APVIAAAVVEVANPV--------------EPVAVAAVEAVAPTVAVVESAAEVAPAVEEA 809
Query: 893 -AGVVEAPVQVAEPQPEVVETTHPEVIAAAVTEQPQVITESDVAVAQEVAEQAEPVVEPQ 951
A VEA + A P V E P + QVI AV EP+ P
Sbjct: 810 PAAAVEAAIPEAAPVVAVEEVVAP--------VEEQVIPTPPRAV--------EPIAVPP 853
Query: 952 EE----TADIEEVVETAEVVVAEPEVVAQPAAPVVAEVAAEVETVAAVEPEVTVEHNHAT 1007
E A+I++ +E + +V+ E A+ A +V+ A VE EV
Sbjct: 854 AEIKPVVANIDQALEASGLVMVETS----------ADKARQVQ-AAVVENEV-------P 895
Query: 1008 APMTRAPAPEYVPEAP 1023
P PAP + + P
Sbjct: 896 RPRRTRPAPVVISDEP 911