Pairwise Alignments

Query, 1061 a.a., fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) from Escherichia coli BW25113

Subject, 489 a.a., ribonuclease from Burkholderia phytofirmans PsJN

 Score =  286 bits (731), Expect = 3e-81
 Identities = 172/458 (37%), Positives = 257/458 (56%), Gaps = 8/458 (1%)

Query: 2   KRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYG 61
           + +LIN T QE  RVALV    + +L +E      +  N+Y GK+ R+ P +++AF+D G
Sbjct: 3   EEILINVTPQET-RVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDIG 61

Query: 62  AERHGFLPLKEIAREYFPANYSAHGRPN--IKDVLREGQEVIVQIDKEERGNKGAALTTF 119
            ER  FL + +I      A    H  P+  I+ ++ EGQ ++VQ+ K+  G KGA L+T 
Sbjct: 62  LERAAFLHVADIWHPRI-AGEPQHQTPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ 120

Query: 120 ISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELP--EGMGLIVRTAGVGKSA 177
           +S+AG  LV +P  P  G IS++IE +   E   A  +  LP  E  G IVRT     ++
Sbjct: 121 VSIAGRTLVYLPQEPHIG-ISQKIESEAEREAVRARLTAVLPADEKGGYIVRTIAEDATS 179

Query: 178 EALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVL 237
           E L  D+++  K W  I    +  P   L++Q+ N+  R  RD++  +   I +D+ +  
Sbjct: 180 EELAGDVAYLRKTWATILSQGQRMPPTSLLYQDLNLAQRVLRDFVNDESSRIQVDSRETY 239

Query: 238 ELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTE 297
           ++     AA   P  SSK+  YTGE PLF  Y IE++I+ A  R V L SGG +VID TE
Sbjct: 240 QMLAD-FAAEFTPAVSSKLHHYTGERPLFDLYNIEAEIQRALSRRVDLKSGGYLVIDQTE 298

Query: 298 ALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQR 357
           A+T ID+N+       + ++T F TNLEAA  IARQLRLR+LGG+I+IDFIDM  V H+ 
Sbjct: 299 AMTTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENVEHRD 358

Query: 358 AVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNE 417
            V   L++A+ +DR R+ ++  S+ GL+EM+R+R   SL       CP C G G V+   
Sbjct: 359 QVLGELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTPR 418

Query: 418 SLSLSILRLIEEEALKENTQEVHAIVPVPIASYLLNEK 455
           ++   +LR I  E+ + N +E   +    +    L E+
Sbjct: 419 TVCYDVLREILRESRQFNPREFRVVASQQVIDLFLEEE 456