Pairwise Alignments

Query, 260 a.a., flagellar component of cell-distal portion of basal-body rod (NCBI) from Escherichia coli BW25113

Subject, 260 a.a., flagellar basal-body rod protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  129 bits (324), Expect = 6e-35
 Identities = 97/260 (37%), Positives = 140/260 (53%), Gaps = 27/260 (10%)

Query: 1   MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDLL----YQTIRQPGAQS 56
           M+S L+ A T     +  ++ IANNLANV+TNG+KR    F+D +    +  I +P A  
Sbjct: 5   MLSGLFGALT----TEHRLNNIANNLANVNTNGYKRDVLAFKDTMALFAHDEIMEPMANV 60

Query: 57  SEQTTLPSGLQIGTGVRP-VATERLH-SQGNLSQTNNSKDVAIKGQGFFQVMLPDGSSAY 114
             +   P  L +    RP +A  R   SQG+   T++  D+AI G GFF+V  P+G   Y
Sbjct: 61  RSKKLFPEPLHVA---RPRIAVARTDFSQGSFHYTSDPLDLAISGNGFFKVRTPEGEF-Y 116

Query: 115 TRDGSFQVDQNGQLVTAGGFQVQPA---ITIPANALSITIGRDGVVSVTQQGQAAPVQVG 171
           TR+G F+   +GQLVT  G+ V      I +P    ++ +  DG ++V        V VG
Sbjct: 117 TRNGHFRQTSDGQLVTMQGWPVLSEGGDINLPQGK-NLQVASDGRIAVDG------VDVG 169

Query: 172 QLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGYVETSNVNVAEELV 231
           QL + T  +  GLE +G NLY   + S A  E   G +   ++ QGY+ETSNV V  E+V
Sbjct: 170 QLQVVTVSDLEGLEKLGGNLYRLREGSTA-GEVPVGPDV--IVSQGYIETSNVEVVNEMV 226

Query: 232 NMIQVQRAYEINSKAVSTTD 251
           NMI+ QR +E   K + T+D
Sbjct: 227 NMIETQRQFEAYQKVMQTSD 246