Pairwise Alignments

Query, 151 a.a., curlin nucleator protein, minor subunit in curli complex (NCBI) from Escherichia coli BW25113

Subject, 354 a.a., Curlin associated repeat. from Pseudomonas stutzeri RCH2

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 6/149 (4%)

Query: 6   LFMMLTILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGS 65
           +F    ++ A  + +  G  LA +  + A+   + S  N+A +  + G N S QL+QG  
Sbjct: 1   MFAHQPLIAAILLGSLPGLALAQAVTSQAITTQNGSD-NEAILEQRGGWNLSNQLQQGEG 59

Query: 66  KLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDAS---ISQGAYGNTAMIIQKGSGN 122
              + V Q+G  N A+  Q    N   + Q+GSAN  +   +S   YG++A I+Q G+ N
Sbjct: 60  HF-SRVEQDGDRNSAQTSQLSLDNHVEVLQSGSANQVTVVQVSDSFYGHSASIVQLGAAN 118

Query: 123 KANITQ-YGTQKTAIVVQRQSQMAIRVTQ 150
            A + Q  G    A + Q+ S    RV Q
Sbjct: 119 VAELEQAEGNGSQATIHQQGSGNTHRVEQ 147



 Score = 46.6 bits (109), Expect = 4e-10
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 24/128 (18%)

Query: 27  ANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQG-GSKLLAVVAQEGSSNRAKIDQ- 84
           + S     V ++S S +  +A I Q G  N A+L Q  G+   A + Q+GS N  +++Q 
Sbjct: 89  SGSANQVTVVQVSDSFYGHSASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHRVEQL 148

Query: 85  ----------TGDYNLAYIDQAGSA----------NDASISQGAY--GNTAMIIQKGSGN 122
                     +G  NL  I Q G+A          N  +I Q  Y  G    + Q G+ N
Sbjct: 149 YYASRVDSRSSGTDNLTEITQNGAASATTQQFGSNNRITIEQNVYPYGGGINVYQDGTSN 208

Query: 123 KANITQYG 130
           +A ++QYG
Sbjct: 209 EARVSQYG 216



 Score = 38.1 bits (87), Expect = 1e-07
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 13/92 (14%)

Query: 46  AAIIGQAGTNNSAQLRQ------GGSKLLAVVAQEGSSNRAKIDQTG---DYNLAYIDQA 96
           +A   Q G+NN   + Q      GG      V Q+G+SN A++ Q G   D     + Q 
Sbjct: 174 SATTQQFGSNNRITIEQNVYPYGGGIN----VYQDGTSNEARVSQYGGRYDTGDVALRQV 229

Query: 97  GSANDASISQGAYGNTAMIIQKGSGNKANITQ 128
           GSANDA + Q    +     Q G GN+    Q
Sbjct: 230 GSANDAQVVQWGGFSNLTFTQDGVGNELTARQ 261



 Score = 37.0 bits (84), Expect = 3e-07
 Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 4/105 (3%)

Query: 51  QAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQGAYG 110
           Q G  N    RQ         +  G+ NR  IDQ+ D  +  I Q G AN+    Q    
Sbjct: 250 QDGVGNELTARQSTRSGTIRGSSVGNDNRVNIDQSFDGPVLDITQNGWANEIDAVQHVGY 309

Query: 111 NTAMIIQKGSGNKANITQ---YGTQKT-AIVVQRQSQMAIRVTQR 151
            TA I Q G  N A + Q   Y  + T A ++Q     +  +TQR
Sbjct: 310 GTASISQIGDRNIAVLNQVPGYPLESTSAAIIQNGVGNSASITQR 354



 Score = 36.6 bits (83), Expect = 4e-07
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 10/131 (7%)

Query: 23  GYDLANS----EYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSS- 77
           G++L+N     E +F+   + +     +A   Q   +N  ++ Q GS     V Q   S 
Sbjct: 47  GWNLSNQLQQGEGHFS--RVEQDGDRNSAQTSQLSLDNHVEVLQSGSANQVTVVQVSDSF 104

Query: 78  --NRAKIDQTGDYNLAYIDQA-GSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKT 134
             + A I Q G  N+A ++QA G+ + A+I Q   GNT  + Q    ++ +    GT   
Sbjct: 105 YGHSASIVQLGAANVAELEQAEGNGSQATIHQQGSGNTHRVEQLYYASRVDSRSSGTDNL 164

Query: 135 AIVVQRQSQMA 145
             + Q  +  A
Sbjct: 165 TEITQNGAASA 175