Pairwise Alignments

Query, 151 a.a., curlin nucleator protein, minor subunit in curli complex (NCBI) from Escherichia coli BW25113

Subject, 428 a.a., Curlin associated repeat. from Pseudomonas stutzeri RCH2

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 6/145 (4%)

Query: 11  TILGAPGIAAAAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAV 70
           +I  A  +   A  D   ++ +  + +L+ S     A + Q G  N A + Q G K  A 
Sbjct: 176 SITQAASMTDRATIDQQGTDNDAHITQLASSG--SIAEVEQFGWRNDAMVSQTGLKHEAY 233

Query: 71  VAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQ--GAYG--NTAMIIQKGSGNKANI 126
           V  +GS N  +++QTG+   A++ Q G+ ND+SI Q  G +G  NTA   Q G+GN+A++
Sbjct: 234 VMSDGSYNTVEVNQTGNAQNAFVLQNGTGNDSSIVQTNGWFGGNNTATTEQFGTGNEADV 293

Query: 127 TQYGTQKTAIVVQRQSQMAIRVTQR 151
            Q G  +TA  +Q        V Q+
Sbjct: 294 YQNGRNQTAKTIQEGHYNVASVDQQ 318



 Score = 61.6 bits (148), Expect = 1e-14
 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 48  IIGQA-GTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQ 106
           IIG + G  NS+ + Q G   LA V QEGS N   + Q+G  +L  + Q G  N+A  SQ
Sbjct: 346 IIGVSYGWANSSDIEQNGRDNLATVRQEGSLNDVMLSQSGADHLIKVTQHGVGNEAIASQ 405

Query: 107 GAYGNTAMIIQKGSGNKANITQY 129
             YGN A I Q G  N A +TQ+
Sbjct: 406 AGYGNAAYITQNGVNNSALVTQH 428



 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 11/100 (11%)

Query: 51  QAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDASISQG--- 107
           Q GT N     Q G+    +    G +N + I+Q G  NLA + Q GS ND  +SQ    
Sbjct: 328 QDGTGNELNAVQNGTDNEIIGVSYGWANSSDIEQNGRDNLATVRQEGSLNDVMLSQSGAD 387

Query: 108 --------AYGNTAMIIQKGSGNKANITQYGTQKTAIVVQ 139
                     GN A+  Q G GN A ITQ G   +A+V Q
Sbjct: 388 HLIKVTQHGVGNEAIASQAGYGNAAYITQNGVNNSALVTQ 427



 Score = 53.9 bits (128), Expect = 3e-12
 Identities = 34/107 (31%), Positives = 47/107 (43%)

Query: 44  NQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYIDQAGSANDAS 103
           N  A   Q GT N A + Q G    A   QEG  N A +DQ G  N  +  Q G+ N+ +
Sbjct: 277 NNTATTEQFGTGNEADVYQNGRNQTAKTIQEGHYNVASVDQQGRGNHLHFHQDGTGNELN 336

Query: 104 ISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQRQSQMAIRVTQ 150
             Q    N  + +  G  N ++I Q G    A V Q  S   + ++Q
Sbjct: 337 AVQNGTDNEIIGVSYGWANSSDIEQNGRDNLATVRQEGSLNDVMLSQ 383



 Score = 52.8 bits (125), Expect = 7e-12
 Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 3/105 (2%)

Query: 38  LSKSSFNQAAII---GQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKIDQTGDYNLAYID 94
           L   + N ++I+   G  G NN+A   Q G+   A V Q G +  AK  Q G YN+A +D
Sbjct: 257 LQNGTGNDSSIVQTNGWFGGNNTATTEQFGTGNEADVYQNGRNQTAKTIQEGHYNVASVD 316

Query: 95  QAGSANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQ 139
           Q G  N     Q   GN    +Q G+ N+     YG   ++ + Q
Sbjct: 317 QQGRGNHLHFHQDGTGNELNAVQNGTDNEIIGVSYGWANSSDIEQ 361



 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 2/101 (1%)

Query: 41  SSFNQAAIIGQAGTNNSAQLRQGGSKL-LAVVAQEGSSNRAKIDQ-TGDYNLAYIDQAGS 98
           +S+   A + Q G  N+  + Q  S    A + Q+G+ N A I Q     ++A ++Q G 
Sbjct: 158 ASYGSQATLTQNGDLNNGSITQAASMTDRATIDQQGTDNDAHITQLASSGSIAEVEQFGW 217

Query: 99  ANDASISQGAYGNTAMIIQKGSGNKANITQYGTQKTAIVVQ 139
            NDA +SQ    + A ++  GS N   + Q G  + A V+Q
Sbjct: 218 RNDAMVSQTGLKHEAYVMSDGSYNTVEVNQTGNAQNAFVLQ 258



 Score = 43.1 bits (100), Expect = 5e-09
 Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 24  YDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGSSNRAKID 83
           Y  ANS      +++ ++  +  A + Q G+ N   L Q G+  L  V Q G  N A   
Sbjct: 351 YGWANS------SDIEQNGRDNLATVRQEGSLNDVMLSQSGADHLIKVTQHGVGNEAIAS 404

Query: 84  QTGDYNLAYIDQAGSANDASISQ 106
           Q G  N AYI Q G  N A ++Q
Sbjct: 405 QAGYGNAAYITQNGVNNSALVTQ 427



 Score = 38.5 bits (88), Expect = 1e-07
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 33  FAVNELSKSSF----NQAAIIGQAGTNNSAQLRQGGSKLLAVVAQEGS-SNRAKIDQTGD 87
           FA N  S+ +     N A ++   G+ N AQ  Q G    A++ Q G+    A   Q G+
Sbjct: 20  FAANNTSEQNQLGINNVAEVLQSGGSGNLAQQGQSGFANNALIEQHGARDTTAAQSQAGN 79

Query: 88  YNLAYIDQAGSANDASI-SQGAYGNTAMIIQKGS-GNKANITQYGTQKTAIVVQRQSQMA 145
           +N+A   Q+ +    S  +Q  +GN A++ Q  +    A+ TQ G +  A   Q  + M 
Sbjct: 80  FNVANSHQSTTVMTGSTQNQRGWGNDALVEQDNTYKTGASQTQNGIRNVAETFQTVTTMT 139

Query: 146 IRVTQR 151
              T +
Sbjct: 140 NATTNQ 145



 Score = 34.7 bits (78), Expect = 2e-06
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 11/124 (8%)

Query: 21  AAGYDLANSEYNFAVNELSKSSFNQAAIIGQAGTNNSAQLRQGGS-KLLAVVAQEGSSNR 79
           A  +++ANS  +  V  ++ S+ NQ       G  N A + Q  + K  A   Q G  N 
Sbjct: 77  AGNFNVANSHQSTTV--MTGSTQNQR------GWGNDALVEQDNTYKTGASQTQNGIRNV 128

Query: 80  AKIDQT-GDYNLAYIDQAGSANDASISQGA-YGNTAMIIQKGSGNKANITQYGTQKTAIV 137
           A+  QT      A  +Q G  N   I+Q A YG+ A + Q G  N  +ITQ  +      
Sbjct: 129 AETFQTVTTMTNATTNQTGKDNYGLITQTASYGSQATLTQNGDLNNGSITQAASMTDRAT 188

Query: 138 VQRQ 141
           + +Q
Sbjct: 189 IDQQ 192