Pairwise Alignments

Query, 180 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

Subject, 177 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 95.5 bits (236), Expect = 4e-25
 Identities = 61/177 (34%), Positives = 91/177 (51%), Gaps = 20/177 (11%)

Query: 1   MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAFSPAGFCVDDAALYFSF 60
           M + P  +W+W Y++ +  + + L + M F + +  K L PDA +   F V+ A  Y  F
Sbjct: 1   MLLMPQRDWQWIYNDSYGVLSVSLGSDMEFLTPYKTKALIPDALATTEFNVEHAKFYIEF 60

Query: 61  EEKC-RDFNLSKEQKAELVLNALVAIRYLKPQMPKSWHFVSHGEMWVPMPGDAACVW--- 116
            E+  +  N++   + +L LNA  A   LKPQMPKSW F +           A CV+   
Sbjct: 61  IERIGKSLNIADAVRVQLALNATAAHFLLKPQMPKSWFFET----------SAVCVYSEL 110

Query: 117 -----LSDTHEQVNLLVVESGENAALCLLAQPCVVIA-GRAMQLGDAIKIMNDRLKP 167
                L    E V +LVVES   A+L +L  P + ++  +AM+  D IK+MNDRL P
Sbjct: 111 GKVFQLKCQGEVVQVLVVESNIQASLVMLLSPELHLSDSKAMRQFDCIKVMNDRLHP 167