Pairwise Alignments

Query, 557 a.a., 30S ribosomal protein S1 (NCBI) from Escherichia coli BW25113

Subject, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

 Score =  937 bits (2423), Expect = 0.0
 Identities = 473/557 (84%), Positives = 514/557 (92%), Gaps = 1/557 (0%)

Query: 1   MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL 60
           MTESFAQLFEE L E + + G+IV+G VVAI+   VLVDAGLKSESAIPAEQFKNA GEL
Sbjct: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60

Query: 61  EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF 120
           E+QVG +VDVALDAVEDGFGET LSREKAKRHEAWI LEKAYE+A TV G+INGKVKGGF
Sbjct: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120

Query: 121 TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA 180
           TVELNGIRAFLPGSLVDVRP+RDT HLE KELEFKVIKLDQKRNNVVVSRRAVIESE+S 
Sbjct: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180

Query: 181 ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ERD+LLE LQEG EVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
Sbjct: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240

Query: 241 ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV 300
           I VKVLKFDR+RTRVSLGLKQLGEDPWVAIAKRYPEG KL+GRVTNLTDYGCFVEIEEGV
Sbjct: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET 360
           EGLVHVSEMDWTNKNIHPSKVVNVGD VEVMVLDIDEERRRISLGLKQCKANPWQ FAE 
Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360

Query: 361 HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL 420
             KGD+V GKIKSITDFGIFIGL+GGIDGLVHLSDISWNV GEEAVRE+KKGDEI+AVVL
Sbjct: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420

Query: 421 QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA 480
            VDAERERISLG+KQ+  DPFN +V+ NKKGA+V G VTAVDAKGAT+EL DGVEGY+RA
Sbjct: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480

Query: 481 SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA 540
           SE SRDR+EDA+L+L+VGD+VEAKFTGVDRKNR I+LS++AKDEA+E++ +AT+NKQ++A
Sbjct: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDEA 540

Query: 541 NFSNNAMAEAFKAAKGE 557
            F  NAMA+AFKAAKGE
Sbjct: 541 AF-GNAMADAFKAAKGE 556