Pairwise Alignments

Query, 588 a.a., fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

Subject, 604 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) from Shewanella loihica PV-4

 Score =  167 bits (423), Expect = 1e-45
 Identities = 134/522 (25%), Positives = 251/522 (48%), Gaps = 19/522 (3%)

Query: 65  PFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQVLDRLQQAGPAWIQGKPAGSWAT 124
           PF ++ L F LR    +L      +    +   +R+QV +   +   ++I  + +G+  +
Sbjct: 89  PFVVIGL-FTLRGLANFLSTYGISYISARMIMDMRQQVFEHYLRLPVSYIDAESSGNLIS 147

Query: 125 LVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFPSNWAAALILLGTAPLIPLFMALVG 184
            V    + +       L  +       + ++  +F ++W  +L +L   PLI L +A+V 
Sbjct: 148 RVTFDTEQIARASGSALITIVRDGITVIGMLGVMFYNSWKLSLCILIVGPLIGLVIAVVS 207

Query: 185 MGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAEIESIRSASEDFRQRTMEVLR 244
                 +++   A+  ++      ++G + + +FG  +AE +     ++D R RTM++  
Sbjct: 208 RKFRKVSKQIQTAMGGVTSVTEQMIKGHKNVLVFGGQQAESQRFAKVNDDNRSRTMKLAL 267

Query: 245 LAFLSSGILEFFTSLSIALVAVYFGFSYLGELDFGHYDTGVTLAAGFLALILAPEFFQPL 304
              +S  ++    SL++A V       Y   L+    D      A  LA +LA    QP+
Sbjct: 268 AQAISQPLVMVIGSLALAFVL------YASSLESMRADLTAGTFATILAAMLA--MLQPI 319

Query: 305 RDLGTFYHAKAQAVGAADSLKTFMETPLAHPQRGEAELASTDP-VTIEAEELFITSPEGK 363
           + L        + + A  ++   ++TP A    G  E    +  ++ +       + EG 
Sbjct: 320 KSLTRVNAEFQRGIAACSTIFAVLDTP-AEVDNGTFETKRVEGRLSFDKVNFRYNNQEGL 378

Query: 364 TLAGPLNFTLPAGQRAVLVGRSGSGKSSLLNALSGFLSY--QGSLRINGIELRDLSPESW 421
            L   ++F +  G+   LVGRSGSGKS++ + ++ F S    G +R++ + LRD    + 
Sbjct: 379 ALK-EVDFQVNPGETLALVGRSGSGKSTIASLITRFYSDLDSGDIRLDDVSLRDYKLAAL 437

Query: 422 RKHLSWVGQNPQLPAATLRDNVLLARPD--ASEQELQAA-LDNAWVSEFLPLLPQGVDTP 478
           R+ ++ V Q   L   T+  N+  A P     EQ + AA L NAW  EF+  +P+G+ T 
Sbjct: 438 RRQVALVSQQVTLINDTIAANIAYAYPGEVTEEQIIDAAKLANAW--EFICNMPEGIYTQ 495

Query: 479 VGDQAARLSVGQAQRVAVARALLNPCSLLLLDEPAASLDAHSEQRVMEALNAASLRQTTL 538
           VG+    LS GQ QR+A+ARA+L    +L+LDE  ++LD  SE+ +   L+     +T++
Sbjct: 496 VGENGVMLSGGQRQRIAIARAILRDAPILILDEATSALDTESEKAIQTGLDNLRQNRTSI 555

Query: 539 MVTHQLEDLADWDVIWVMQDGRIIEQGRYAELSVAGGPFATL 580
           ++ H+L  + + + I V+  G+++E+G ++EL    G +  L
Sbjct: 556 VIAHRLSTVENANQILVVDQGKVVERGTHSELLAKQGIYYNL 597