Pairwise Alignments

Query, 573 a.a., fused cysteine transporter subunits of ABC superfamily: membrane component/ATP-binding component (NCBI) from Escherichia coli BW25113

Subject, 600 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) from Shewanella sp. ANA-3

 Score =  191 bits (484), Expect = 9e-53
 Identities = 163/596 (27%), Positives = 284/596 (47%), Gaps = 40/596 (6%)

Query: 2   RALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFL-----SASAVA-GVA--- 52
           + LL YL   K  K M  L +V  IV  L     ++  G F+     SA A++ G+A   
Sbjct: 14  KRLLGYL---KPMKGMFLLSVVGLIVYGLVDAAFISFIGPFIDKGFSSAPAISNGIALPT 70

Query: 53  --GLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDA----TFRVLQHLRIYTFSKLLPL 106
             G ++ N +L  A +    I   + R F   VS       + R++  +R   F   L L
Sbjct: 71  SQGFHADNQVLLMAPI--VVILMFSLRGFANFVSTYGISYMSARLIMDMRQQVFEHYLSL 128

Query: 107 SPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLV--GAFVVIMVVTIGLSFLDFTLAF 164
             + + +   G L+++V  D + +       +  +V  G  V+ M+  +  +    +L  
Sbjct: 129 PVSYMDKENTGNLISKVTFDTEQIARASGSALISIVRDGVTVIGMLALMFYNSWKLSLCI 188

Query: 165 -TLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGASDRYR 223
             +G IM L + ++   F +  K     +  +     Q +    +G   +  FG  +   
Sbjct: 189 LVIGPIMGLVITIVSRRFRKVSKQIQTAMGDVSAATEQMI----KGHKNVLAFGGQETET 244

Query: 224 TQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQPGALIALF 283
            +      +      + +   A+SQ ++++IG+ A+  +L+ AS             A  
Sbjct: 245 ARFAKVNDRNRHQNMKLAVAQAISQPLIMVIGSFALAFVLYAASLDSMKADLTAGTFATI 304

Query: 284 VFCALAAFEALAPVTGAFQHLGQVIASAVRISDLTDQKPEVTFPDTQTRVADRVSLTLR- 342
           +   +A  + +  +T       + IA+   + +L D  PE    DT T    R    LR 
Sbjct: 305 LGAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTLPE---SDTGTYTVKRAKGNLRF 361

Query: 343 -DVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQQLTRAWDP-QQGEILLN 400
            +V F+Y  Q ++AL  I  +V  G+ +A++GR+G GKST+   +TR +   + G+ILL+
Sbjct: 362 DNVSFSYDGQERRALDNIDFEVTQGQTLALVGRSGSGKSTIASLVTRFYTGLESGDILLD 421

Query: 401 DSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALSEILRRVGLEKLLE 460
           D  I   +  +LR  +++V Q+V LF+ T+ +N+  A PG +     +I++   L   +E
Sbjct: 422 DVSIYDYSLKSLRNQVALVSQQVTLFNDTIANNIAYAYPGEATR--EQIIQAATLAHAME 479

Query: 461 -----DAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDATTESQILE 515
                  GL++ +GE G  LSGG+ +R+AIARA+L DAP+++LDE T  LD  +E  I +
Sbjct: 480 FIEQLPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQQ 539

Query: 516 LLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRYYQFKQ 571
            L  + + +T +++ HRL  +    QI+V+D G+I+E+GTH  LL   G Y +  Q
Sbjct: 540 GLDNLRQNRTSVVIAHRLSTIESADQILVVDQGRIVERGTHKSLLELGGMYAKLYQ 595