Pairwise Alignments

Query, 299 a.a., putative surface protein (VIMSS) from Escherichia coli BW25113

Subject, 202 a.a., putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  105 bits (262), Expect = 8e-28
 Identities = 60/167 (35%), Positives = 99/167 (59%), Gaps = 3/167 (1%)

Query: 133 TEASEYTLILLLFLVGIQLRNNGMTLKQI-VLNRRGMIVAVVVVVSSLIG-GLINAFILD 190
           ++ S Y L  L+F VGI + N+  TLK    LN R M + V+ ++ +L G  +   F+  
Sbjct: 30  SKLSYYALCGLMFCVGISIGNDPNTLKSFRSLNPRLMFLPVMTILGTLAGCAVAGIFMSQ 89

Query: 191 LPINTALAMASGFGWYSLSGILLTESFGPVIGSAAFFNDLARELIAIMLIPGLIRR-SRS 249
              +  +A+ +GFG+YSLS I +TE  GP +G+ A  +++ RE+IA++  P L++   + 
Sbjct: 90  RTSSDCMAVGAGFGYYSLSSIFITEYKGPELGTIALLSNIMREIIALLGAPLLVKYFGKL 149

Query: 250 TALGLCGATSMDFTLPVLQRTGGLDMVPAAIVHGFILSLLVPILIAF 296
             + + GAT+MD TLP++ R  G + V  +I HGF++   VP L+ F
Sbjct: 150 APISVGGATTMDTTLPIITRCSGKEFVIISIFHGFVVDFSVPFLVTF 196