Pairwise Alignments

Query, 337 a.a., putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) from Escherichia coli BW25113

Subject, 345 a.a., GDP-mannose 4,6-dehydratase from Rhodopseudomonas palustris CGA009

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 83/349 (23%), Positives = 148/349 (42%), Gaps = 62/349 (17%)

Query: 2   KVLVTGATSGLGRNAVEFLCQKGISVRATGRNEA--------MGKLLEKMGAEFVPADLT 53
           K LV G+ S  G + V +L  +G  V    R++           K  ++    F   DL 
Sbjct: 20  KYLVIGSNSFTGASMVSYLLDQGADVVGISRSDEPHPAFLPYRWKKADRF--RFQKLDLN 77

Query: 54  ELVSSQAKVMLAG----IDTLWHCSSFTSPWGTQQAFDLANVRATRRLGE-WAVAWGVRN 108
             + +  +++ A     I      S     W     + + NV +T RL E   +   +  
Sbjct: 78  HDLDAIMQLVTAERFPCIINFAAQSMVGESWANPDHWFMTNVVSTVRLHERLRICDFLER 137

Query: 109 FIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTRFTIL-- 166
           ++H+++P +Y +          F P   +  +A S+AA +  +    +A     F +L  
Sbjct: 138 YVHVTTPEVYGNATGTLTEDAVFDP---STPYAVSRAAGDMSLRSYFRAYG---FPVLFT 191

Query: 167 RPQSLFGPHDKVF--IPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQE--- 221
           R  +++GP  +++  +PR   +    G  L  HGG      T   + +HA  +A      
Sbjct: 192 RAANVYGPGQRLYRIVPRTI-LFIKLGRKLQLHGGG-----TSERSFIHAADVADATRRI 245

Query: 222 ACD-KLPSGRVYNITNGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRK 280
           AC+ KL  G  Y+I+     T+R++V+ +       C +  V +   D +    ERLG+ 
Sbjct: 246 ACNGKL--GDSYHISTDRIVTIRALVEMI-------CAMMRVRFE--DQVEIVGERLGKD 294

Query: 281 SAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWL 329
           +A                + LD ++ + ELG+   ITL++GIE+T AW+
Sbjct: 295 AA----------------YKLDSSKLRSELGWSDQITLEQGIEQTIAWI 327