Pairwise Alignments

Query, 337 a.a., putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) from Escherichia coli BW25113

Subject, 387 a.a., 3-beta hydroxysteroid dehydrogenase/isomerase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  114 bits (285), Expect = 4e-30
 Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 17/336 (5%)

Query: 5   VTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGAEFVPADLTELVSSQAKVML 64
           VTGA   LG+   + L   GI V    R   +   LE +G   V  DL      Q K  +
Sbjct: 58  VTGAGGFLGKAICQRLIAAGIKVTGFARGRYLE--LEALGVTMVQGDLVN--PEQVKQAM 113

Query: 65  AGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISSPSLYFDYHHH 124
            G D ++H +S    WG + ++   NV+    +     A  +   ++ S+PS+ F     
Sbjct: 114 QGCDIVFHVASKAGVWGDRDSYFCPNVKGAANVIAACKALKINKLVYTSTPSVTFAGEDE 173

Query: 125 RDIKEDFRPH--RFANEFARSKAASEEVI---NMLSQANPQ--TRFTILRPQSLFGPHDK 177
             I E   P+  RF N +A SKA +E+++   N  S  N     +   LRP  ++GP+D 
Sbjct: 174 SGINES-TPYASRFLNYYAHSKAIAEKMMLDANQSSSTNAAYVLKTVALRPHLIWGPNDP 232

Query: 178 VFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPS--GRVYNIT 235
             +PR+       G + L      LVD  Y +NA +A  LA+ E C   P   G+ Y I+
Sbjct: 233 HLVPRVL-ARGRLGKLKLVGREDKLVDTIYIDNAAYAHVLAALELCQATPKCQGKAYFIS 291

Query: 236 NGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGR--KSAKEPPLTHYGVS 293
           N E  T+  ++  ++    +    + VP  +   +   +E   R     +EP +T +   
Sbjct: 292 NDEPVTMAKMLNMILACDGLPPVTQRVPQMLAYAVGAVLETAYRLLNKQEEPIMTRFVAK 351

Query: 294 KLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWL 329
           +L+     DI+ A+++ GY  +++++EG+++  A L
Sbjct: 352 QLSCSHYFDISAAKQDFGYSALVSIEEGMKRLKASL 387