Pairwise Alignments

Query, 337 a.a., putative nucleotide di-P-sugar epimerase or dehydratase (VIMSS) from Escherichia coli BW25113

Subject, 327 a.a., NADH dehydrogenase (ubiquinone) (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 57.0 bits (136), Expect = 6e-13
 Identities = 78/325 (24%), Positives = 131/325 (40%), Gaps = 45/325 (13%)

Query: 3   VLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMGA----EFVPADLTELVSS 58
           V + G +  +GR     + Q+G  VR   R       +   GA    E + +++ +  S 
Sbjct: 5   VTIFGGSGFVGRYIARRMAQEGWRVRVAVRRPNEALFVRTYGAVGQVEPILSNIRDDASV 64

Query: 59  QAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAVAWGVRNFIHISS---- 114
           QA V   G D + +C    S  G +  F L       R+   +   GV  F+ IS+    
Sbjct: 65  QAAV--TGADVVINCVGILSETG-KNTFGLVQSHGAARVARLSAEAGVGRFVQISAIGAD 121

Query: 115 PSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMLSQANPQTRFTILRPQSLFGP 174
           P+   DY                   AR+KA  E+ +    QA P+    ILRP  +FGP
Sbjct: 122 PAAKSDY-------------------ARTKAEGEQAV---LQAMPEA--VILRPSIVFGP 157

Query: 175 HDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLASQEACDKLPSGRVYNI 234
            D+ F  R A  M   G IL   G        Y ++   A   A + A  +   G +Y +
Sbjct: 158 EDQ-FFNRFA-SMSRLGPILPVVGAETKFQPVYVDDVARA---AVKAALGQAKPG-IYEL 211

Query: 235 TNGEHRTLRSIVQKLIDELNIDCRIRSVPYPMLDMIARSMERLGRKS---AKEPPLTHYG 291
              +  + R ++  ++  ++    I +VP+P+  ++  +++ + + S        LTH  
Sbjct: 212 GGPDVNSFRELMAHMLSVIDRRRLIVNVPFPVAHVMGMTLDLVQKLSLGIIHNGMLTHDQ 271

Query: 292 VSKLNFDFTLDI-TRAQEELGYQPV 315
           V  L  D  +       ++LG +PV
Sbjct: 272 VRNLAKDNVVAADAMGFDDLGIEPV 296