Pairwise Alignments

Query, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

Subject, 266 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Xanthomonas campestris pv. campestris strain 8004

 Score =  117 bits (292), Expect = 3e-31
 Identities = 85/249 (34%), Positives = 114/249 (45%), Gaps = 41/249 (16%)

Query: 7   LVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTAD-DFDSSLATLTD 65
           L AA LLL  CA          +     + A+    R  ++V+H+T       SL TL  
Sbjct: 16  LCAAVLLLGACAHAPQRNPLAQWVPSPNQDAR----RPILIVLHFTDQHSVQQSLTTLRG 71

Query: 66  K----QVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELE 121
           +    +VS+HYL+     RY       QLV +   AWH G   W   T +N  SIGIEL+
Sbjct: 72  RNSGGRVSAHYLIGEDGRRY-------QLVADSARAWHGGAGRWGTITDINSASIGIELD 124

Query: 122 NRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLF 181
           N G +          F PAQI +L+ L +D+  R  I    +V H D+AP RK+DPGPLF
Sbjct: 125 NDGHES---------FAPAQIDSLLVLLEDLCTRLRIPRTQIVGHEDVAPTRKNDPGPLF 175

Query: 182 PWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDVKPDMTPREQRRV 241
           PW++LA  G G WP         A  +P  P       + LA  GY +       +    
Sbjct: 176 PWKRLADAGFGRWP---------AADSPAAPAG-FDPWQALALLGYSLD------DPAAT 219

Query: 242 IMAFQMHFR 250
           + AF  HFR
Sbjct: 220 LQAFHHHFR 228