Pairwise Alignments

Query, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

Subject, 283 a.a., N-acetylmuramoyl-L-alanine amidase, family 2 from Pseudomonas syringae pv. syringae B728a

 Score =  185 bits (469), Expect = 1e-51
 Identities = 106/259 (40%), Positives = 153/259 (59%), Gaps = 15/259 (5%)

Query: 12  LLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRIKVLVIHYTADDFDSSLATLTDKQVSSH 71
           LLL  CA         G +LDT   +     R + +V+HYT+   + SL  LT  +VS+H
Sbjct: 35  LLLTACAS--------GPRLDTSHPSVNFDGRAQYVVMHYTSTSLEHSLQLLTHGEVSAH 86

Query: 72  YLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIGIELENRGWQKSAGV 131
           YL+       + K  I++LV E   AWHAG S W G T LN +SIGIE+ N G++++   
Sbjct: 87  YLIGD-----DSKATIYKLVDENARAWHAGESEWEGRTWLNSSSIGIEIVNPGFKETPTG 141

Query: 132 KYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQRKDDPGPLFPWQQLAQQGI 191
           + + P+  AQ Q++I L KDI+ R  I P++++ H+DIAP RK DPGPLFPW++LA +G+
Sbjct: 142 RLWYPYTEAQTQSIIVLLKDIVKRNRIDPKHIIGHSDIAPLRKQDPGPLFPWKRLAAEGL 201

Query: 192 GAWPDAQRVNFYLAGRAPHTPVDTASLLELLARYGYDV-KPDMTPREQRRVIMAFQMHFR 250
           G WPD ++V    A  A + P  T    + LAR GY   +        R+V+ AFQMH+R
Sbjct: 202 GNWPDERQVAQRQALLATNLPSIT-WFQQQLARLGYSTPQTGELDVATRQVLAAFQMHYR 260

Query: 251 PTLYNGEADAETQAIAEAL 269
           P  ++GE DA++ AI + L
Sbjct: 261 PARFDGEPDAQSAAILQVL 279