Pairwise Alignments

Query, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

Subject, 241 a.a., AmpD (negative regulator of AmpC) (NCBI) from Rhodospirillum rubrum S1H

 Score =  142 bits (358), Expect = 7e-39
 Identities = 91/229 (39%), Positives = 120/229 (52%), Gaps = 26/229 (11%)

Query: 44  IKVLVIHYTA-DDFDSSLATLTDKQ--VSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHA 100
           I +LVIHYT      ++LA L D Q  VS+H+L+      Y       +LV E+  AWHA
Sbjct: 29  IDMLVIHYTGMPSAQAALARLLDPQAQVSAHWLIDEDGTAY-------KLVEERRRAWHA 81

Query: 101 GISAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP 160
           G+SAW G   +N  SIGIEL N G +       + PF  AQ+  LI L + I+ R+ I  
Sbjct: 82  GVSAWGGRPGVNARSIGIELVNPGHEFG-----YRPFPEAQMTTLIALGRGILERHPIPA 136

Query: 161 ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASLLE 220
            +VV HAD+AP RK+DPG LF WQ+LA  GIG WP        L  R             
Sbjct: 137 AHVVGHADVAPTRKEDPGELFDWQRLASNGIGRWPPPP-----LGVRPETVDATEGEAAC 191

Query: 221 LLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEAL 269
           LL + GYD+         +  ++AFQ HFRP   +G  D+ET  + +AL
Sbjct: 192 LLEQIGYDIS------SLQATVLAFQRHFRPKRLDGRIDSETLWLIKAL 234