Pairwise Alignments

Query, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

Subject, 207 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase from Herbaspirillum seropedicae SmR1

 Score = 91.7 bits (226), Expect = 1e-23
 Identities = 55/137 (40%), Positives = 76/137 (55%), Gaps = 20/137 (14%)

Query: 55  DFDSS--LATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLN 112
           DFD+      L   +VS+H+L+     R +G+  + Q VP    AWHAG+S++ G  R N
Sbjct: 68  DFDAHPYFDQLRPLRVSAHFLI-----RRDGE--VVQFVPAHRRAWHAGVSSFEGRERCN 120

Query: 113 DTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKPENVVAHADIAPQ 172
           D SIGIELE            F PF PAQ  AL+ L++ +++RY +    V  H  IAP 
Sbjct: 121 DFSIGIELEGTD---------FTPFTPAQYDALLGLSQALVSRYGLSA--VAGHEHIAPL 169

Query: 173 RKDDPGPLFPWQQLAQQ 189
           RK DPGP F WQ+  ++
Sbjct: 170 RKTDPGPFFDWQRYREE 186