Pairwise Alignments

Query, 741 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

Subject, 903 a.a., Small-conductance mechanosensitive channel from Paraburkholderia bryophila 376MFSha3.1

 Score =  186 bits (472), Expect = 5e-51
 Identities = 156/589 (26%), Positives = 259/589 (43%), Gaps = 37/589 (6%)

Query: 170 ARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVG------QVLSDNLNAGSRTIAFQQ 223
           A+ K     +W  L  +     I  L LL L +FVG       + +D+     R +    
Sbjct: 272 AKGKQNATHHWTLLQRLPRALLITVLRLLPLAVFVGAASALMSIFTDDGTPQDRAL---- 327

Query: 224 SLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAV 283
              ++ + L      +      P    LR   + D  A +  R +  + S++G G  +A 
Sbjct: 328 DSLVDIYVLCRVIVIISGFFLQPTAPRLRLLRMSDAWAAFVHRWVIRIVSVVGVGSAIAE 387

Query: 284 PIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAF 343
              S  ++         ++ L   V    LI +  K + + L+     +     +   A 
Sbjct: 388 IAHSLGLSEAAHLALMKVVALVGHVMISILILQCAKPVGE-LIRQRMAARKSLEMVGNAL 446

Query: 344 ALVWHWLASAYFIVLFFFSLFDPGN-----------SLKFMMGATVRSLAIIGIAAFVSG 392
           A  W WL+    + L+F    D  N           SL  ++GA V ++ I G  A +  
Sbjct: 447 ADAWAWLSVFVVMALWFIWALDVQNGYHALLHLGGMSLAVLVGARVLAIVIFGGLARLFN 506

Query: 393 MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFDFW 452
                  K++ +  H  R YP L +R+  W+             V  + LL  WG+ D  
Sbjct: 507 GHEDAAGKSL-VHQHAFRYYP-LLRRVVSWIIGI----------VTALALLQVWGV-DVG 553

Query: 453 NWLQNGA-GQKTVDILIRIALILFFSAVGWTVLASLIENRLAS-DIHGRPLPSARTRTLL 510
              ++G+ G +    ++ I +    + + W  +   +E RL      G  + +AR RTLL
Sbjct: 554 ELFRDGSVGHRLASAIVTIGVAAVIALIVWESVNVSVEQRLDRWTTSGDLVRAARLRTLL 613

Query: 511 TLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGVFIQF 570
            + R  L  +I+ + ++  LSE+GVNI PLLAGA   G+A+ FGSQ LV+D ITG+F+  
Sbjct: 614 PMLRTGLFCVIALVVVLTGLSELGVNIGPLLAGASIFGVALGFGSQKLVQDFITGIFLLM 673

Query: 571 ENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGIGSVVAN 630
           EN M  GD VT+  ++GTVE +SIR+V +R   G+   +P+SS++T  N  RGIG+    
Sbjct: 674 ENAMQVGDWVTLAGVSGTVEYLSIRTVRLRGSDGSLFTVPFSSVSTVNNTNRGIGNAAVR 733

Query: 631 YDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLP 690
            ++   +D D A   LK+  A L E E+ +  I+ + +F G+  +  +A TL        
Sbjct: 734 VNIVFGQDVDLAIDTLKEIGAALREEEKFKDGILSDFSFWGVDAVDGSAVTLAGQMQCRD 793

Query: 691 LKQWTVRFALDSQVKKHFDLAGVRAPVQTYQVLPAPGATPAEPLPPGEP 739
             +W V+   + ++   F   G+        +L     + A  +  GEP
Sbjct: 794 SARWGVQREFNRRILDQFRERGIEIANPQRNLLTWDPDSVAPRVEAGEP 842



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 14/86 (16%)

Query: 6  FILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQKKAAYGALADVLDNDTSRKEL 65
          F+ F LLGAPA   ++   T  +    T  P      EQ + A      VL++   R ++
Sbjct: 9  FLFFLLLGAPAVFAAVTAATPASGATVTLTP------EQARQA----LSVLNDPKRRAQV 58

Query: 66 IDQLRTVAA----TPPAEPVPKIVPP 87
           D L+ +AA    + PA   P    P
Sbjct: 59 ADTLQAIAAAGALSTPASAAPAASAP 84