Pairwise Alignments

Query, 741 a.a., putative transport protein (VIMSS) from Escherichia coli BW25113

Subject, 876 a.a., small mechanosensitive ion channel protein MscS from Burkholderia phytofirmans PsJN

 Score =  177 bits (449), Expect = 2e-48
 Identities = 193/740 (26%), Positives = 318/740 (42%), Gaps = 51/740 (6%)

Query: 22  PGVTTTTTTDSTTEPAPEPDIEQKKA-AYGALADVLDNDTSRKELIDQLR-------TVA 73
           P  + +  + +    AP P  + + A +  ++   LDND  R  L+ QL+        VA
Sbjct: 99  PASSASGASAAEAASAPSPASQAELAHSLDSVISTLDNDRQRTALVAQLKKLRDVSKNVA 158

Query: 74  ATPPAEPVP----KIVPPTLVEEQTVLQKVTEVSRHYGEALSARFGQLYRNITGSPHKPF 129
              PA+P P     I       E  V Q  T V R++G   +A   +LY  I+G  H+ F
Sbjct: 159 PPAPAQPSPGLLGAIASGIASFESDVHQGRTPV-RYWGGRFNAAGNELYTIISGQGHESF 217

Query: 130 NPQTFSNALTHFSMLAVLVFGFYWLIRLCALPLYRKMG-QWARQKNRERSNWLQLPAMII 188
               FS A       A      Y   RL     YR+ G     Q N      L      +
Sbjct: 218 GRILFSMAAMLAGWGACAGALIYVQHRL-----YRRFGIVMGLQPNPTTRELLIFALRRV 272

Query: 189 GAFIIDLLLLALTLFVGQVLSDNLNAGSRTIAFQQSLFLNAFALIEFFKAVLRLIFCPNV 248
           G +II    +A  LFV + + D L    RT+    +  + A A+      ++  +F    
Sbjct: 273 GPWII--AFVAALLFV-RAMPDALG---RTLGMVVAYAIVAGAVFSAICLIMFSLFGSGH 326

Query: 249 AELRPFTIQDESARYWSRRLSWLSSLIGYGLIVAVPI-ISNQVNVQIGALANVIIMLCMT 307
             +    + D +     RR+ ++  + G     AV   +++Q+   + AL +    +   
Sbjct: 327 RRIAVRLLIDHA-----RRVLFVVGVCGALGDAAVNYDVAHQLGSNLAALISTAANMTAA 381

Query: 308 VWALYLIFRNKKEITQHLLNFAEHSLAFFSLFIRAF---ALVWHWLASAYFIVLFFFSLF 364
           V   Y     ++ +   + N              AF   A +WH             +L 
Sbjct: 382 VLTGYFALAFRRPVAHLIRNRPYEQRTNHKAATDAFDVLAALWHVPVLVLATASVVATLG 441

Query: 365 DPGNSLKFMMGATVRSLAIIGIAAFVSGMFSRWLAKTITLSPHTQRNYPELQKRLNGWLS 424
             G+S + ++  +V + A++ +A F+S +  R    T   S  T+R  P L + L  +  
Sbjct: 442 GSGSS-ENVLQISVVTAALLVLAFFLSAVVLRL---TRPRSARTRRRSPYLTRLLRFF-- 495

Query: 425 AALKTARILTVCVAVM---LLLSAWGLFDFWNWLQNGAGQKTVDILIRIALILFFSAVGW 481
                  +LT+ + +    L    WG+       ++ A +     +  I   +F + + W
Sbjct: 496 -----GTLLTLFIWLFFFELAARLWGVSLAAVVEESVAARGIAHAVTAIVATVFIAWLLW 550

Query: 482 TVLASLIENRL--ASDIHGRPLPSARTRTLLTLFRNALAVIISTITIMIVLSEIGVNIAP 539
            ++ + I   L  A   +    PS R RT+L L RN L V I TI  ++  + +G+N+ P
Sbjct: 551 ILVDTAITEALNPAGPRNKARAPSMRARTMLPLVRNVLLVSIMTIAGIVTAANLGINVTP 610

Query: 540 LLAGAGALGLAISFGSQTLVKDIITGVFIQFENGMNTGDLVTI-GPLTGTVERMSIRSVG 598
           LLAGAG +GLAI FG+Q+LV D+ITG+FI  E+ ++ GD + + G   GTVE +SIR+V 
Sbjct: 611 LLAGAGVIGLAIGFGAQSLVTDLITGLFIIIEDTISVGDWIDVDGGHAGTVEHLSIRTVR 670

Query: 599 VRQDTGAYHIIPWSSITTFANFVRGIGSVVANYDVDRHEDADKANQALKDAVAELMENEE 658
           +R   GA H IP+S I    N  R     V    +    D D+  Q +++  A+LM +  
Sbjct: 671 LRDGQGAIHAIPFSQIKIVKNLSRDFAYAVFEVRMSFTTDVDQITQLIREVGADLMADFR 730

Query: 659 IRGLIIGEPNFAGIVGLSNTAFTLRVSFTTLPLKQWTVRFALDSQVKKHFDLAGVRAPVQ 718
            R  ++G     G+         ++    T PL+QW+V  A + ++K+  D AG+  PV 
Sbjct: 731 YRREMLGPIEVWGLDRFDPNWMVVKGQIKTRPLQQWSVARAFNLRLKRKMDEAGIEIPVP 790

Query: 719 TYQVLPAPGATPAEPLPPGE 738
             +V  +   +  +PL   E
Sbjct: 791 QMRVYTSSKDSEGQPLQDDE 810