Pairwise Alignments

Query, 716 a.a., ATP-dependent DNA helicase (NCBI) from Escherichia coli BW25113

Subject, 637 a.a., ATP-dependent DNA helicase from Rahnella sp. WP5

 Score =  193 bits (490), Expect = 3e-53
 Identities = 197/696 (28%), Positives = 299/696 (42%), Gaps = 108/696 (15%)

Query: 17  ALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQ 76
           AL ++I  F PR PQR M   V+K ++G++G  L +EA TG GKT +YL P +       
Sbjct: 10  ALAQKIEGFKPREPQRLMAQAVSKAISGKQG--LVVEAGTGTGKTYAYLAPAL----RSG 63

Query: 77  KTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAF----GRGRYVCPRNLT--ALAST 130
           K +++ST +  LQDQ+YS+DLP   K+   L F        GR  Y+C   L   +L+  
Sbjct: 64  KKVIISTGSKNLQDQLYSRDLP---KVASALNFKGRLALLKGRSNYLCLERLEQQSLSGG 120

Query: 131 EPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTD 190
           +   Q L          ++ EE        GD+ T         T +  D  +W  +++ 
Sbjct: 121 DLASQALSELAHLRHWSSSTEE--------GDISTC--------TVVPEDSFVWPLVTST 164

Query: 191 KASCLNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAM---ESEAVLPDPKNLLLVL 247
             +CL  +C  Y+EC    ARR+  +A+VVV NH L MA M   ES      P+  +++ 
Sbjct: 165 NDNCLGSDCPLYKECFVVKARRKAMDADVVVVNHHLFMADMVVKESGFGELIPEADVMIF 224

Query: 248 DEGHHLPDVA----------RDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPP 297
           DE H +PD+A          R  L+M+ +IT   YR ++    +L  +            
Sbjct: 225 DEAHQIPDIASQYFGQQVTSRQLLDMAKDITIA-YRTEVRDSVQLQKSA----------- 272

Query: 298 LAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTE 357
               +RL+    +    +       NL     Q A  R  +  L D+ LE+C  + KL+ 
Sbjct: 273 ----DRLSQSTMDFRLALGEPGFRGNLRDVLSQPAIQRALL--LLDDALELCYDVVKLS- 325

Query: 358 MLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVT 417
               L    L D +            R  L  N             RL  L   S    +
Sbjct: 326 ----LGRSALLDAA----------FERATLYRN-------------RLKRLKDVSIPGYS 358

Query: 418 KWATREEREGQLHLWFHCVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGL 477
            W     R    H       + V+D+   ++       I TSATL   +      E  GL
Sbjct: 359 YWYECNSR----HFVLALTPLSVTDKFSEMMKEKPGAWIFTSATLSVNDQLHHFTERLGL 414

Query: 478 KEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFRKQVESKKHLGM 537
            E      + L SPF++ +Q  + +PR   E ++    + +A M    R  +E+ K  G 
Sbjct: 415 DEA---ETLLLPSPFDYAKQALLCVPRFLPESNVQGSSKQLARM---LRPLIEANK--GR 466

Query: 538 LVLFASGRAMQRFL--DYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFA 595
                +   M R L  ++   L L +L+QG+  + +L+     +      ++LV   SF 
Sbjct: 467 CFFLCTSHKMMRELAEEFRASLTLPVLLQGETSKGQLL----AQFVEAGNALLVATSSFW 522

Query: 596 EGLDLKGDLLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVG 655
           EG+D++GD LS V I K+ F   D P++    E  +     PF    LP A   L Q VG
Sbjct: 523 EGVDVRGDALSCVIIDKLPFTSPDDPLLKARIEDCRLRGGDPFNDVQLPDAVITLKQGVG 582

Query: 656 RLIRSHGCWGEVVIYDKRLLTKNYGKRLLDALPVFP 691
           RLIR     G +VI D RL+ + YG+  L++LP  P
Sbjct: 583 RLIRDTDDRGVMVICDNRLVMRPYGEVFLNSLPPTP 618