Pairwise Alignments

Query, 454 a.a., RNA helicase (NCBI) from Escherichia coli BW25113

Subject, 474 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score =  442 bits (1137), Expect = e-128
 Identities = 240/468 (51%), Positives = 316/468 (67%), Gaps = 18/468 (3%)

Query: 1   MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
           M FD LGL+P+IL+AV E GY E TPIQQQAIP VL+G+DL A AQTGTGKTA FTLPL+
Sbjct: 1   MRFDELGLAPEILKAVTEMGYAEATPIQQQAIPLVLQGKDLKACAQTGTGKTAAFTLPLI 60

Query: 61  Q---HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINP 117
           Q   HL T  P +  + PVRAL+L PTRELA Q+ E+V+ Y+KY + RS+ +FGGV I P
Sbjct: 61  QRLLHLDTASP-SPAKHPVRALMLAPTRELALQVYESVKSYTKYTHFRSICLFGGVDIKP 119

Query: 118 QMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKL 177
           Q+ +++ GV+ +VATPGRLLD   Q +V  +QV+ LVLDEADRMLDMGFI DI+R+L  L
Sbjct: 120 QIAEMKKGVEFVVATPGRLLDHVEQKSVSFNQVQALVLDEADRMLDMGFIPDIQRILNML 179

Query: 178 PAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLS 237
           P  RQ+LLFSATFS++I+ LA+ +L +P+ +EVARRN  +D +T  VH V + RK++LL 
Sbjct: 180 PKTRQSLLFSATFSNEIQRLADTMLQSPILVEVARRNQVNDTITHRVHPVAETRKKDLLI 239

Query: 238 HMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIR 297
            ++  G   Q LVF RTK G   LA +L + GI + +IHG+KSQ  R +AL  FK+G  +
Sbjct: 240 KLLRSGEITQTLVFMRTKQGCGRLARELERAGIAADSIHGDKSQNERIKALDAFKNGGCK 299

Query: 298 VLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLL 357
           VLVATD+AARGLDI+ LP+V+N+ELP+ PEDYVHRIGRTGRA   G A+SLVC  E   L
Sbjct: 300 VLVATDVAARGLDIDHLPYVINFELPHTPEDYVHRIGRTGRAGRQGNAISLVCAHEVGYL 359

Query: 358 RDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQQRGGGGRGQG---GGRGQQQPRRGE 414
            DIEKL+K +I ++A+ G+EP+   +  P  +G+++R            GR +   +R  
Sbjct: 360 ADIEKLIKMQIEQVAVAGFEPEMDYEYPP-GSGKKRRAHETHAPSQPVAGRSKPPVKRNN 418

Query: 415 GGAKSA---------SAKPAEKPSRRLGDAKPAGEQQRRRRPRKPAAA 453
             AK            A PA  PS+      P G+     +P+KP  A
Sbjct: 419 MIAKDGFDFSKPYEPKAAPATVPSKEEAAHTPVGKPD-PHKPKKPMVA 465